Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH20Q9HBT6 AC097639.1-201ENST00000565519 1891 ntBASIC20.67■□□□□ 0.9
CDH20Q9HBT6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDH20Q9HBT6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH20Q9HBT6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH20Q9HBT6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH20Q9HBT6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH20Q9HBT6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH20Q9HBT6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CDH20Q9HBT6 AC087393.1-201ENST00000582896 145 ntBASIC20.65■□□□□ 0.9
CDH20Q9HBT6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDH20Q9HBT6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH20Q9HBT6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH20Q9HBT6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH20Q9HBT6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDH20Q9HBT6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH20Q9HBT6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH20Q9HBT6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH20Q9HBT6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH20Q9HBT6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH20Q9HBT6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH20Q9HBT6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 AC074183.2-201ENST00000623112 922 ntBASIC20.61■□□□□ 0.89
CDH20Q9HBT6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH20Q9HBT6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH20Q9HBT6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH20Q9HBT6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH20Q9HBT6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH20Q9HBT6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH20Q9HBT6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH20Q9HBT6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH20Q9HBT6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH20Q9HBT6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH20Q9HBT6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH20Q9HBT6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH20Q9HBT6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH20Q9HBT6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDH20Q9HBT6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms