Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.74■■■□□ 2.03
EFCC1Q9HA90 AL356740.2-201ENST00000601559 647 ntBASIC27.74■■■□□ 2.03
EFCC1Q9HA90 MIR6724-1-201ENST00000616420 92 ntBASIC27.74■■■□□ 2.03
EFCC1Q9HA90 MIR6724-2-201ENST00000616483 92 ntBASIC27.74■■■□□ 2.03
EFCC1Q9HA90 MIR6724-4-201ENST00000617390 92 ntBASIC27.74■■■□□ 2.03
EFCC1Q9HA90 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
EFCC1Q9HA90 MIR6724-3-201ENST00000622482 92 ntBASIC27.74■■■□□ 2.03
EFCC1Q9HA90 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
EFCC1Q9HA90 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
EFCC1Q9HA90 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
EFCC1Q9HA90 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
EFCC1Q9HA90 ZNRF2P3-201ENST00000424200 374 ntBASIC27.73■■■□□ 2.03
EFCC1Q9HA90 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.73■■■□□ 2.03
EFCC1Q9HA90 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
EFCC1Q9HA90 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
EFCC1Q9HA90 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.73■■■□□ 2.03
EFCC1Q9HA90 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
EFCC1Q9HA90 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.72■■■□□ 2.03
EFCC1Q9HA90 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
EFCC1Q9HA90 MIR4466-201ENST00000606121 54 ntBASIC27.72■■■□□ 2.03
EFCC1Q9HA90 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.71■■■□□ 2.03
EFCC1Q9HA90 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
EFCC1Q9HA90 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
EFCC1Q9HA90 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
EFCC1Q9HA90 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
EFCC1Q9HA90 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.69■■■□□ 2.02
EFCC1Q9HA90 LINC01003-201ENST00000564834 1764 ntBASIC27.68■■■□□ 2.02
EFCC1Q9HA90 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
EFCC1Q9HA90 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
EFCC1Q9HA90 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.67■■■□□ 2.02
EFCC1Q9HA90 MTDHP2-201ENST00000601468 714 ntBASIC27.67■■■□□ 2.02
EFCC1Q9HA90 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
EFCC1Q9HA90 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
EFCC1Q9HA90 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
EFCC1Q9HA90 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
EFCC1Q9HA90 AC104564.3-201ENST00000582367 638 ntBASIC27.66■■■□□ 2.02
EFCC1Q9HA90 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
EFCC1Q9HA90 BX255925.1-201ENST00000566954 1854 ntBASIC27.66■■■□□ 2.02
EFCC1Q9HA90 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 AC026271.2-201ENST00000428091 497 ntBASIC27.65■■■□□ 2.02
EFCC1Q9HA90 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
EFCC1Q9HA90 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
EFCC1Q9HA90 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.64■■■□□ 2.02
EFCC1Q9HA90 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
EFCC1Q9HA90 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
EFCC1Q9HA90 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
EFCC1Q9HA90 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.63■■■□□ 2.01
EFCC1Q9HA90 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
EFCC1Q9HA90 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
EFCC1Q9HA90 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
EFCC1Q9HA90 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.61■■■□□ 2.01
EFCC1Q9HA90 AC142381.2-201ENST00000566120 298 ntBASIC27.61■■■□□ 2.01
EFCC1Q9HA90 MIR4281-201ENST00000580852 62 ntBASIC27.61■■■□□ 2.01
EFCC1Q9HA90 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.61■■■□□ 2.01
EFCC1Q9HA90 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
EFCC1Q9HA90 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
EFCC1Q9HA90 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.6■■■□□ 2.01
EFCC1Q9HA90 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
EFCC1Q9HA90 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.6■■■□□ 2.01
EFCC1Q9HA90 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
EFCC1Q9HA90 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.58■■■□□ 2.01
EFCC1Q9HA90 AL512631.2-201ENST00000604634 923 ntBASIC27.58■■■□□ 2.01
EFCC1Q9HA90 MIR5787-201ENST00000611784 55 ntBASIC27.58■■■□□ 2.01
EFCC1Q9HA90 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.58■■■□□ 2
EFCC1Q9HA90 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms