Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 AP004609.3-201ENST00000610705 1884 ntBASIC19.14■□□□□ 0.65
NKX6-2Q9C056 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NKX6-2Q9C056 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NKX6-2Q9C056 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NKX6-2Q9C056 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-2Q9C056 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NKX6-2Q9C056 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX6-2Q9C056 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 AC096887.2-201ENST00000623443 1957 ntBASIC19.12■□□□□ 0.65
NKX6-2Q9C056 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX6-2Q9C056 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX6-2Q9C056 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-2Q9C056 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-2Q9C056 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-2Q9C056 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-2Q9C056 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-2Q9C056 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX6-2Q9C056 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX6-2Q9C056 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-2Q9C056 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NKX6-2Q9C056 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NKX6-2Q9C056 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX6-2Q9C056 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.08■□□□□ 0.64
NKX6-2Q9C056 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX6-2Q9C056 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 AC010501.1-201ENST00000606270 1962 ntBASIC19.06■□□□□ 0.64
NKX6-2Q9C056 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-2Q9C056 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-2Q9C056 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-2Q9C056 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 WHAMMP2-203ENST00000563942 1603 ntBASIC19.03■□□□□ 0.64
NKX6-2Q9C056 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 AC135983.2-203ENST00000454486 1613 ntBASIC19.03■□□□□ 0.64
NKX6-2Q9C056 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-2Q9C056 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-2Q9C056 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms