Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.34■■■□□ 2.61
PCDH11XQ9BZA7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDH11XQ9BZA7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PCDH11XQ9BZA7 AC010997.5-201ENST00000609182 354 ntBASIC31.33■■■□□ 2.61
PCDH11XQ9BZA7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.33■■■□□ 2.61
PCDH11XQ9BZA7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDH11XQ9BZA7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PCDH11XQ9BZA7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.32■■■□□ 2.6
PCDH11XQ9BZA7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
PCDH11XQ9BZA7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PCDH11XQ9BZA7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
PCDH11XQ9BZA7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
PCDH11XQ9BZA7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PCDH11XQ9BZA7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
PCDH11XQ9BZA7 MTDHP2-201ENST00000601468 714 ntBASIC31.31■■■□□ 2.6
PCDH11XQ9BZA7 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.31■■■□□ 2.6
PCDH11XQ9BZA7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PCDH11XQ9BZA7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
PCDH11XQ9BZA7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PCDH11XQ9BZA7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PCDH11XQ9BZA7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 AL136116.3-201ENST00000402907 1138 ntBASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 MIR3621-201ENST00000580529 85 ntBASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 MIR6724-1-201ENST00000616420 92 ntBASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 MIR6724-2-201ENST00000616483 92 ntBASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 MIR6724-4-201ENST00000617390 92 ntBASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 MIR6724-3-201ENST00000622482 92 ntBASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDH11XQ9BZA7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PCDH11XQ9BZA7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PCDH11XQ9BZA7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.28■■■□□ 2.6
PCDH11XQ9BZA7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.27■■■□□ 2.6
PCDH11XQ9BZA7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.26■■■□□ 2.6
PCDH11XQ9BZA7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
PCDH11XQ9BZA7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
PCDH11XQ9BZA7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
PCDH11XQ9BZA7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
PCDH11XQ9BZA7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.26■■■□□ 2.6
PCDH11XQ9BZA7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.26■■■□□ 2.59
PCDH11XQ9BZA7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCDH11XQ9BZA7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PCDH11XQ9BZA7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
PCDH11XQ9BZA7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.25■■■□□ 2.59
PCDH11XQ9BZA7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCDH11XQ9BZA7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.25■■■□□ 2.59
PCDH11XQ9BZA7 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.25■■■□□ 2.59
PCDH11XQ9BZA7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
PCDH11XQ9BZA7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.24■■■□□ 2.59
PCDH11XQ9BZA7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
PCDH11XQ9BZA7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDH11XQ9BZA7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
PCDH11XQ9BZA7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
PCDH11XQ9BZA7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDH11XQ9BZA7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.23■■■□□ 2.59
PCDH11XQ9BZA7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PCDH11XQ9BZA7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
PCDH11XQ9BZA7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.22■■■□□ 2.59
PCDH11XQ9BZA7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.21■■■□□ 2.59
PCDH11XQ9BZA7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
PCDH11XQ9BZA7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.21■■■□□ 2.59
PCDH11XQ9BZA7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
PCDH11XQ9BZA7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.21■■■□□ 2.59
PCDH11XQ9BZA7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PCDH11XQ9BZA7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PCDH11XQ9BZA7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.2■■■□□ 2.59
PCDH11XQ9BZA7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.2■■■□□ 2.58
PCDH11XQ9BZA7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.2■■■□□ 2.58
PCDH11XQ9BZA7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDH11XQ9BZA7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC31.19■■■□□ 2.58
PCDH11XQ9BZA7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PCDH11XQ9BZA7 AC110285.6-201ENST00000617652 491 ntBASIC31.19■■■□□ 2.58
PCDH11XQ9BZA7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.19■■■□□ 2.58
PCDH11XQ9BZA7 AL356740.2-201ENST00000601559 647 ntBASIC31.18■■■□□ 2.58
PCDH11XQ9BZA7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PCDH11XQ9BZA7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PCDH11XQ9BZA7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PCDH11XQ9BZA7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PCDH11XQ9BZA7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
PCDH11XQ9BZA7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.16■■■□□ 2.58
PCDH11XQ9BZA7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.16■■■□□ 2.58
PCDH11XQ9BZA7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.16■■■□□ 2.58
PCDH11XQ9BZA7 MIR4466-201ENST00000606121 54 ntBASIC31.16■■■□□ 2.58
PCDH11XQ9BZA7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms