Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.65■■□□□ 1.54
LRRC3BQ96PB8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
LRRC3BQ96PB8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRRC3BQ96PB8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.64■■□□□ 1.54
LRRC3BQ96PB8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC3BQ96PB8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.63■■□□□ 1.53
LRRC3BQ96PB8 AC092028.1-203ENST00000608262 953 ntBASIC24.63■■□□□ 1.53
LRRC3BQ96PB8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC3BQ96PB8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
LRRC3BQ96PB8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC3BQ96PB8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.61■■□□□ 1.53
LRRC3BQ96PB8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC3BQ96PB8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.61■■□□□ 1.53
LRRC3BQ96PB8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC3BQ96PB8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LRRC3BQ96PB8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRRC3BQ96PB8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LRRC3BQ96PB8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC3BQ96PB8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.59■■□□□ 1.53
LRRC3BQ96PB8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.59■■□□□ 1.53
LRRC3BQ96PB8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRC3BQ96PB8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
LRRC3BQ96PB8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
LRRC3BQ96PB8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRC3BQ96PB8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
LRRC3BQ96PB8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.58■■□□□ 1.53
LRRC3BQ96PB8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRC3BQ96PB8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRC3BQ96PB8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRC3BQ96PB8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.57■■□□□ 1.52
LRRC3BQ96PB8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRRC3BQ96PB8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
LRRC3BQ96PB8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRRC3BQ96PB8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRC3BQ96PB8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.56■■□□□ 1.52
LRRC3BQ96PB8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
LRRC3BQ96PB8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.56■■□□□ 1.52
LRRC3BQ96PB8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.55■■□□□ 1.52
LRRC3BQ96PB8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LRRC3BQ96PB8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LRRC3BQ96PB8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRC3BQ96PB8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRC3BQ96PB8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
LRRC3BQ96PB8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 AC011551.1-201ENST00000614101 683 ntBASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRC3BQ96PB8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
LRRC3BQ96PB8 AC131281.2-201ENST00000520478 145 ntBASIC24.49■■□□□ 1.51
LRRC3BQ96PB8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.49■■□□□ 1.51
LRRC3BQ96PB8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LRRC3BQ96PB8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRRC3BQ96PB8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LRRC3BQ96PB8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRRC3BQ96PB8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms