Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
SCLT1Q96NL6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.33■■□□□ 1.81
SCLT1Q96NL6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.33■■□□□ 1.81
SCLT1Q96NL6 AC022616.5-201ENST00000518796 181 ntBASIC26.33■■□□□ 1.81
SCLT1Q96NL6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SCLT1Q96NL6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SCLT1Q96NL6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.33■■□□□ 1.81
SCLT1Q96NL6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.32■■□□□ 1.8
SCLT1Q96NL6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.31■■□□□ 1.8
SCLT1Q96NL6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SCLT1Q96NL6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCLT1Q96NL6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCLT1Q96NL6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCLT1Q96NL6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.29■■□□□ 1.8
SCLT1Q96NL6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCLT1Q96NL6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCLT1Q96NL6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SCLT1Q96NL6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCLT1Q96NL6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SCLT1Q96NL6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.28■■□□□ 1.8
SCLT1Q96NL6 THA1P-201ENST00000590384 1145 ntBASIC26.28■■□□□ 1.8
SCLT1Q96NL6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.28■■□□□ 1.8
SCLT1Q96NL6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.28■■□□□ 1.8
SCLT1Q96NL6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCLT1Q96NL6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCLT1Q96NL6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.27■■□□□ 1.8
SCLT1Q96NL6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SCLT1Q96NL6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCLT1Q96NL6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCLT1Q96NL6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCLT1Q96NL6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.26■■□□□ 1.79
SCLT1Q96NL6 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.26■■□□□ 1.79
SCLT1Q96NL6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.26■■□□□ 1.79
SCLT1Q96NL6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.26■■□□□ 1.79
SCLT1Q96NL6 AC239859.2-201ENST00000444165 318 ntBASIC26.25■■□□□ 1.79
SCLT1Q96NL6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SCLT1Q96NL6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SCLT1Q96NL6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SCLT1Q96NL6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCLT1Q96NL6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SCLT1Q96NL6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SCLT1Q96NL6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.24■■□□□ 1.79
SCLT1Q96NL6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCLT1Q96NL6 GUSBP5-201ENST00000418136 578 ntBASIC26.23■■□□□ 1.79
SCLT1Q96NL6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.23■■□□□ 1.79
SCLT1Q96NL6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCLT1Q96NL6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCLT1Q96NL6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCLT1Q96NL6 AL592295.1-201ENST00000400984 884 ntBASIC26.22■■□□□ 1.79
SCLT1Q96NL6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.22■■□□□ 1.79
SCLT1Q96NL6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.21■■□□□ 1.79
SCLT1Q96NL6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SCLT1Q96NL6 KRT18P24-201ENST00000344739 1156 ntBASIC26.2■■□□□ 1.78
SCLT1Q96NL6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SCLT1Q96NL6 AC120024.1-201ENST00000562672 995 ntBASIC26.2■■□□□ 1.78
SCLT1Q96NL6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.2■■□□□ 1.78
SCLT1Q96NL6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 BX664725.1-201ENST00000438252 379 ntBASIC26.19■■□□□ 1.78
SCLT1Q96NL6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 KRT125P-201ENST00000546827 989 ntBASIC26.19■■□□□ 1.78
SCLT1Q96NL6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCLT1Q96NL6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 642.3 ms