Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
EAF1Q96JC9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EAF1Q96JC9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EAF1Q96JC9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EAF1Q96JC9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EAF1Q96JC9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EAF1Q96JC9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EAF1Q96JC9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EAF1Q96JC9 SPCS2P3-201ENST00000500401 656 ntBASIC19.23■□□□□ 0.67
EAF1Q96JC9 AC018755.3-202ENST00000596210 929 ntBASIC19.23■□□□□ 0.67
EAF1Q96JC9 AC129492.7-201ENST00000622992 756 ntBASIC19.23■□□□□ 0.67
EAF1Q96JC9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.22■□□□□ 0.67
EAF1Q96JC9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EAF1Q96JC9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EAF1Q96JC9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EAF1Q96JC9 DUX4L9-201ENST00000449051 1259 ntBASIC19.21■□□□□ 0.67
EAF1Q96JC9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EAF1Q96JC9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.21■□□□□ 0.67
EAF1Q96JC9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EAF1Q96JC9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
EAF1Q96JC9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EAF1Q96JC9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EAF1Q96JC9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EAF1Q96JC9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EAF1Q96JC9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
EAF1Q96JC9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EAF1Q96JC9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EAF1Q96JC9 KRT18P10-201ENST00000388836 1287 ntBASIC19.19■□□□□ 0.66
EAF1Q96JC9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EAF1Q96JC9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.19■□□□□ 0.66
EAF1Q96JC9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EAF1Q96JC9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EAF1Q96JC9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EAF1Q96JC9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
EAF1Q96JC9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.18■□□□□ 0.66
EAF1Q96JC9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 MIR6765-201ENST00000614092 87 ntBASIC19.18■□□□□ 0.66
EAF1Q96JC9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EAF1Q96JC9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.17■□□□□ 0.66
EAF1Q96JC9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EAF1Q96JC9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.16■□□□□ 0.66
EAF1Q96JC9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EAF1Q96JC9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EAF1Q96JC9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.16■□□□□ 0.66
EAF1Q96JC9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
EAF1Q96JC9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
EAF1Q96JC9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EAF1Q96JC9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.15■□□□□ 0.66
EAF1Q96JC9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EAF1Q96JC9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EAF1Q96JC9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.15■□□□□ 0.66
EAF1Q96JC9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EAF1Q96JC9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.15■□□□□ 0.66
EAF1Q96JC9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.15■□□□□ 0.66
EAF1Q96JC9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EAF1Q96JC9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
EAF1Q96JC9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EAF1Q96JC9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.14■□□□□ 0.66
EAF1Q96JC9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EAF1Q96JC9 AC097639.1-201ENST00000565519 1891 ntBASIC19.14■□□□□ 0.65
EAF1Q96JC9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.14■□□□□ 0.65
EAF1Q96JC9 AC004987.1-201ENST00000428627 508 ntBASIC19.14■□□□□ 0.65
EAF1Q96JC9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.14■□□□□ 0.65
EAF1Q96JC9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.14■□□□□ 0.65
EAF1Q96JC9 AC012354.3-201ENST00000623734 483 ntBASIC19.14■□□□□ 0.65
EAF1Q96JC9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
EAF1Q96JC9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EAF1Q96JC9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EAF1Q96JC9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.13■□□□□ 0.65
EAF1Q96JC9 ATP5G2P3-201ENST00000429083 425 ntBASIC19.13■□□□□ 0.65
EAF1Q96JC9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.13■□□□□ 0.65
EAF1Q96JC9 DUX4L18-201ENST00000553347 1267 ntBASIC19.13■□□□□ 0.65
EAF1Q96JC9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EAF1Q96JC9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
EAF1Q96JC9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
EAF1Q96JC9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EAF1Q96JC9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
EAF1Q96JC9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EAF1Q96JC9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
EAF1Q96JC9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
EAF1Q96JC9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms