Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF183Q96D59 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF183Q96D59 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF183Q96D59 AL035685.1-201ENST00000636663 812 ntBASIC17.44■□□□□ 0.38
RNF183Q96D59 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF183Q96D59 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RNF183Q96D59 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF183Q96D59 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF183Q96D59 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF183Q96D59 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF183Q96D59 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF183Q96D59 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF183Q96D59 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF183Q96D59 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF183Q96D59 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF183Q96D59 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF183Q96D59 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF183Q96D59 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF183Q96D59 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF183Q96D59 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF183Q96D59 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF183Q96D59 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF183Q96D59 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF183Q96D59 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF183Q96D59 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 AC103724.3-201ENST00000564481 992 ntBASIC17.41■□□□□ 0.38
RNF183Q96D59 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF183Q96D59 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF183Q96D59 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF183Q96D59 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF183Q96D59 AC022616.5-201ENST00000518796 181 ntBASIC17.4■□□□□ 0.38
RNF183Q96D59 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF183Q96D59 AL031848.2-201ENST00000607670 837 ntBASIC17.4■□□□□ 0.38
RNF183Q96D59 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF183Q96D59 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF183Q96D59 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF183Q96D59 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF183Q96D59 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF183Q96D59 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF183Q96D59 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF183Q96D59 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF183Q96D59 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF183Q96D59 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF183Q96D59 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF183Q96D59 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF183Q96D59 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RNF183Q96D59 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF183Q96D59 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF183Q96D59 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF183Q96D59 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF183Q96D59 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF183Q96D59 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF183Q96D59 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF183Q96D59 AC009299.2-201ENST00000482477 511 ntBASIC17.38■□□□□ 0.37
RNF183Q96D59 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF183Q96D59 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF183Q96D59 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF183Q96D59 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF183Q96D59 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF183Q96D59 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF183Q96D59 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF183Q96D59 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RNF183Q96D59 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF183Q96D59 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF183Q96D59 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF183Q96D59 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF183Q96D59 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF183Q96D59 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF183Q96D59 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF183Q96D59 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF183Q96D59 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF183Q96D59 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF183Q96D59 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF183Q96D59 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF183Q96D59 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF183Q96D59 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF183Q96D59 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF183Q96D59 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF183Q96D59 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF183Q96D59 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms