Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM10Q969L4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.3■□□□□ 0.68
LSM10Q969L4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM10Q969L4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM10Q969L4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM10Q969L4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM10Q969L4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LSM10Q969L4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.3■□□□□ 0.68
LSM10Q969L4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM10Q969L4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM10Q969L4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LSM10Q969L4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM10Q969L4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM10Q969L4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LSM10Q969L4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM10Q969L4 MIR3648-2-201ENST00000581792 180 ntBASIC19.28■□□□□ 0.68
LSM10Q969L4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSM10Q969L4 MIR3648-1-201ENST00000615959 180 ntBASIC19.28■□□□□ 0.68
LSM10Q969L4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.28■□□□□ 0.68
LSM10Q969L4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LSM10Q969L4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM10Q969L4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM10Q969L4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM10Q969L4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM10Q969L4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM10Q969L4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM10Q969L4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM10Q969L4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM10Q969L4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM10Q969L4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM10Q969L4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM10Q969L4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM10Q969L4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM10Q969L4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM10Q969L4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LSM10Q969L4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LSM10Q969L4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LSM10Q969L4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.25■□□□□ 0.67
LSM10Q969L4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LSM10Q969L4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.25■□□□□ 0.67
LSM10Q969L4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.25■□□□□ 0.67
LSM10Q969L4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.25■□□□□ 0.67
LSM10Q969L4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM10Q969L4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
LSM10Q969L4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LSM10Q969L4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
LSM10Q969L4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.24■□□□□ 0.67
LSM10Q969L4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
LSM10Q969L4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.24■□□□□ 0.67
LSM10Q969L4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.24■□□□□ 0.67
LSM10Q969L4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSM10Q969L4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LSM10Q969L4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.23■□□□□ 0.67
LSM10Q969L4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSM10Q969L4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM10Q969L4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM10Q969L4 AC133561.1-201ENST00000568600 2415 ntBASIC19.23■□□□□ 0.67
LSM10Q969L4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSM10Q969L4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSM10Q969L4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.22■□□□□ 0.67
LSM10Q969L4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM10Q969L4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM10Q969L4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.22■□□□□ 0.67
LSM10Q969L4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.22■□□□□ 0.67
LSM10Q969L4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.22■□□□□ 0.67
LSM10Q969L4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSM10Q969L4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSM10Q969L4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSM10Q969L4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms