Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
HTRA3P83110 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HTRA3P83110 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HTRA3P83110 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.41■■■□□ 2.14
HTRA3P83110 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
HTRA3P83110 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.4■■■□□ 2.14
HTRA3P83110 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HTRA3P83110 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
HTRA3P83110 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
HTRA3P83110 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HTRA3P83110 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
HTRA3P83110 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
HTRA3P83110 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
HTRA3P83110 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.38■■■□□ 2.13
HTRA3P83110 AC004911.1-201ENST00000416316 871 ntBASIC28.38■■■□□ 2.13
HTRA3P83110 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
HTRA3P83110 AP004833.2-201ENST00000532228 1454 ntBASIC28.38■■■□□ 2.13
HTRA3P83110 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
HTRA3P83110 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
HTRA3P83110 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HTRA3P83110 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.37■■■□□ 2.13
HTRA3P83110 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HTRA3P83110 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.36■■■□□ 2.13
HTRA3P83110 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HTRA3P83110 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
HTRA3P83110 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.36■■■□□ 2.13
HTRA3P83110 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC28.36■■■□□ 2.13
HTRA3P83110 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HTRA3P83110 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.35■■■□□ 2.13
HTRA3P83110 CA15P2-201ENST00000611168 834 ntBASIC28.35■■■□□ 2.13
HTRA3P83110 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HTRA3P83110 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
HTRA3P83110 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
HTRA3P83110 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
HTRA3P83110 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
HTRA3P83110 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
HTRA3P83110 HLA-L-209ENST00000420110 1011 ntBASIC28.33■■■□□ 2.13
HTRA3P83110 SRD5A1P1-201ENST00000442297 786 ntBASIC28.33■■■□□ 2.13
HTRA3P83110 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.33■■■□□ 2.13
HTRA3P83110 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.33■■■□□ 2.13
HTRA3P83110 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HTRA3P83110 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.33■■■□□ 2.13
HTRA3P83110 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.33■■■□□ 2.13
HTRA3P83110 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.32■■■□□ 2.12
HTRA3P83110 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.32■■■□□ 2.12
HTRA3P83110 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
HTRA3P83110 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.32■■■□□ 2.12
HTRA3P83110 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HTRA3P83110 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.31■■■□□ 2.12
HTRA3P83110 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HTRA3P83110 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.31■■■□□ 2.12
HTRA3P83110 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
HTRA3P83110 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
HTRA3P83110 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
HTRA3P83110 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
HTRA3P83110 KRT18P5-201ENST00000436075 1291 ntBASIC28.3■■■□□ 2.12
HTRA3P83110 SLC47A1P1-202ENST00000449666 945 ntBASIC28.3■■■□□ 2.12
HTRA3P83110 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HTRA3P83110 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.29■■■□□ 2.12
HTRA3P83110 IRS3P-201ENST00000223076 1006 ntBASIC28.29■■■□□ 2.12
HTRA3P83110 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.29■■■□□ 2.12
HTRA3P83110 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HTRA3P83110 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HTRA3P83110 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.29■■■□□ 2.12
HTRA3P83110 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
HTRA3P83110 KRT18P10-201ENST00000388836 1287 ntBASIC28.28■■■□□ 2.12
HTRA3P83110 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.28■■■□□ 2.12
HTRA3P83110 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.28■■■□□ 2.12
HTRA3P83110 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
HTRA3P83110 ABHD17AP1-201ENST00000358206 933 ntBASIC28.27■■■□□ 2.12
HTRA3P83110 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.27■■■□□ 2.12
HTRA3P83110 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.27■■■□□ 2.12
HTRA3P83110 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.26■■■□□ 2.12
HTRA3P83110 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
HTRA3P83110 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
HTRA3P83110 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.26■■■□□ 2.11
HTRA3P83110 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.26■■■□□ 2.11
HTRA3P83110 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.26■■■□□ 2.11
HTRA3P83110 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HTRA3P83110 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
HTRA3P83110 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.25■■■□□ 2.11
HTRA3P83110 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.25■■■□□ 2.11
HTRA3P83110 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.25■■■□□ 2.11
HTRA3P83110 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.25■■■□□ 2.11
HTRA3P83110 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
HTRA3P83110 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HTRA3P83110 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.24■■■□□ 2.11
HTRA3P83110 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.24■■■□□ 2.11
HTRA3P83110 AC034268.1-201ENST00000441047 882 ntBASIC28.24■■■□□ 2.11
HTRA3P83110 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.24■■■□□ 2.11
HTRA3P83110 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.24■■■□□ 2.11
HTRA3P83110 RASA4CP-201ENST00000424092 1398 ntBASIC28.24■■■□□ 2.11
HTRA3P83110 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HTRA3P83110 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.23■■■□□ 2.11
HTRA3P83110 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HTRA3P83110 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HTRA3P83110 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
HTRA3P83110 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
HTRA3P83110 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.23■■■□□ 2.11
HTRA3P83110 MIR4767-201ENST00000582827 78 ntBASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms