Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LCN1P31025 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.89■■□□□ 1.09
LCN1P31025 AC129492.7-201ENST00000622992 756 ntBASIC21.89■■□□□ 1.09
LCN1P31025 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LCN1P31025 RPS2P7-201ENST00000447334 885 ntBASIC21.88■■□□□ 1.09
LCN1P31025 DUX4L9-201ENST00000449051 1259 ntBASIC21.88■■□□□ 1.09
LCN1P31025 SPCS2P3-201ENST00000500401 656 ntBASIC21.88■■□□□ 1.09
LCN1P31025 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN1P31025 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LCN1P31025 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.87■■□□□ 1.09
LCN1P31025 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LCN1P31025 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LCN1P31025 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.87■■□□□ 1.09
LCN1P31025 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LCN1P31025 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LCN1P31025 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P31025 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P31025 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.86■■□□□ 1.09
LCN1P31025 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P31025 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LCN1P31025 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P31025 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P31025 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P31025 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.85■■□□□ 1.09
LCN1P31025 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P31025 AC087393.1-201ENST00000582896 145 ntBASIC21.85■■□□□ 1.09
LCN1P31025 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.85■■□□□ 1.09
LCN1P31025 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P31025 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LCN1P31025 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.85■■□□□ 1.09
LCN1P31025 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P31025 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P31025 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LCN1P31025 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P31025 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P31025 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.84■■□□□ 1.09
LCN1P31025 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
LCN1P31025 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LCN1P31025 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LCN1P31025 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LCN1P31025 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LCN1P31025 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LCN1P31025 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.82■■□□□ 1.08
LCN1P31025 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.82■■□□□ 1.08
LCN1P31025 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P31025 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.82■■□□□ 1.08
LCN1P31025 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LCN1P31025 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LCN1P31025 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.82■■□□□ 1.08
LCN1P31025 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P31025 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P31025 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P31025 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LCN1P31025 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P31025 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P31025 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P31025 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P31025 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LCN1P31025 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.81■■□□□ 1.08
LCN1P31025 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.8■■□□□ 1.08
LCN1P31025 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LCN1P31025 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P31025 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P31025 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P31025 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
LCN1P31025 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
LCN1P31025 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
LCN1P31025 AC020928.2-201ENST00000588717 2197 ntBASIC21.8■■□□□ 1.08
LCN1P31025 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P31025 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
LCN1P31025 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P31025 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P31025 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.79■■□□□ 1.08
LCN1P31025 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.79■■□□□ 1.08
LCN1P31025 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LCN1P31025 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P31025 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LCN1P31025 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.78■■□□□ 1.08
LCN1P31025 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
LCN1P31025 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P31025 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LCN1P31025 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P31025 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P31025 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P31025 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.78■■□□□ 1.08
LCN1P31025 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P31025 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
LCN1P31025 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LCN1P31025 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LCN1P31025 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LCN1P31025 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LCN1P31025 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LCN1P31025 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.77■■□□□ 1.08
LCN1P31025 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LCN1P31025 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LCN1P31025 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LCN1P31025 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LCN1P31025 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LCN1P31025 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LCN1P31025 AC142381.3-201ENST00000568208 1670 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms