Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 AC092803.2-201ENST00000564287 1899 ntBASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA2E9PIF3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA2E9PIF3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NPIPA2E9PIF3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA2E9PIF3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.6■■□□□ 1.05
NPIPA2E9PIF3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.59■■□□□ 1.05
NPIPA2E9PIF3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.58■■□□□ 1.05
NPIPA2E9PIF3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.58■■□□□ 1.04
NPIPA2E9PIF3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 AC091060.1-201ENST00000623524 1766 ntBASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPA2E9PIF3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 GUSBP5-201ENST00000418136 578 ntBASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NPIPA2E9PIF3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.55■■□□□ 1.04
NPIPA2E9PIF3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 AC239859.2-201ENST00000444165 318 ntBASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 AC022616.5-201ENST00000518796 181 ntBASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 AC145676.1-201ENST00000514988 2004 ntBASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NPIPA2E9PIF3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.53■■□□□ 1.04
NPIPA2E9PIF3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPA2E9PIF3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NPIPA2E9PIF3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NPIPA2E9PIF3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA2E9PIF3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPA2E9PIF3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.5■■□□□ 1.03
NPIPA2E9PIF3 AC131212.1-201ENST00000613771 668 ntBASIC21.5■■□□□ 1.03
NPIPA2E9PIF3 ERN1-208ENST00000606895 2068 ntBASIC21.5■■□□□ 1.03
NPIPA2E9PIF3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.5■■□□□ 1.03
NPIPA2E9PIF3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 AC010501.1-201ENST00000606270 1962 ntBASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPA2E9PIF3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.48■■□□□ 1.03
NPIPA2E9PIF3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms