Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRBV5-3A0A0A0MS03 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.37■■□□□ 1.17
TRBV5-3A0A0A0MS03 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TRBV5-3A0A0A0MS03 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.37■■□□□ 1.17
TRBV5-3A0A0A0MS03 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRBV5-3A0A0A0MS03 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 AC141586.4-201ENST00000624558 1573 ntBASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
TRBV5-3A0A0A0MS03 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 AC060814.1-201ENST00000554326 538 ntBASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.34■■□□□ 1.17
TRBV5-3A0A0A0MS03 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRBV5-3A0A0A0MS03 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.33■■□□□ 1.17
TRBV5-3A0A0A0MS03 MIR6089-201ENST00000616698 64 ntBASIC22.33■■□□□ 1.17
TRBV5-3A0A0A0MS03 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.33■■□□□ 1.17
TRBV5-3A0A0A0MS03 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.33■■□□□ 1.16
TRBV5-3A0A0A0MS03 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRBV5-3A0A0A0MS03 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRBV5-3A0A0A0MS03 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.32■■□□□ 1.16
TRBV5-3A0A0A0MS03 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 MIR3960-201ENST00000583311 91 ntBASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV5-3A0A0A0MS03 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRBV5-3A0A0A0MS03 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRBV5-3A0A0A0MS03 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 AC092296.2-201ENST00000589470 999 ntBASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRBV5-3A0A0A0MS03 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.27■■□□□ 1.16
TRBV5-3A0A0A0MS03 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
TRBV5-3A0A0A0MS03 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms