Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 AC137630.3-201ENST00000607245 391 ntBASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
LEMD3Q9Y2U8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.39■■■□□ 2.3
LEMD3Q9Y2U8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
LEMD3Q9Y2U8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
LEMD3Q9Y2U8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
LEMD3Q9Y2U8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LEMD3Q9Y2U8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
LEMD3Q9Y2U8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.37■■■□□ 2.29
LEMD3Q9Y2U8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.37■■■□□ 2.29
LEMD3Q9Y2U8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.37■■■□□ 2.29
LEMD3Q9Y2U8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
LEMD3Q9Y2U8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
LEMD3Q9Y2U8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LEMD3Q9Y2U8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LEMD3Q9Y2U8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LEMD3Q9Y2U8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.36■■■□□ 2.29
LEMD3Q9Y2U8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.36■■■□□ 2.29
LEMD3Q9Y2U8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.36■■■□□ 2.29
LEMD3Q9Y2U8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
LEMD3Q9Y2U8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LEMD3Q9Y2U8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.35■■■□□ 2.29
LEMD3Q9Y2U8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.35■■■□□ 2.29
LEMD3Q9Y2U8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
LEMD3Q9Y2U8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.34■■■□□ 2.29
LEMD3Q9Y2U8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
LEMD3Q9Y2U8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
LEMD3Q9Y2U8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.33■■■□□ 2.29
LEMD3Q9Y2U8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
LEMD3Q9Y2U8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
LEMD3Q9Y2U8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
LEMD3Q9Y2U8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.32■■■□□ 2.28
LEMD3Q9Y2U8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.32■■■□□ 2.28
LEMD3Q9Y2U8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LEMD3Q9Y2U8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
LEMD3Q9Y2U8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.32■■■□□ 2.28
LEMD3Q9Y2U8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.32■■■□□ 2.28
LEMD3Q9Y2U8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
LEMD3Q9Y2U8 AC021242.3-201ENST00000607598 1377 ntBASIC29.31■■■□□ 2.28
LEMD3Q9Y2U8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
LEMD3Q9Y2U8 UNC93B8-201ENST00000511903 705 ntBASIC29.31■■■□□ 2.28
LEMD3Q9Y2U8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LEMD3Q9Y2U8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.3■■■□□ 2.28
LEMD3Q9Y2U8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.3■■■□□ 2.28
LEMD3Q9Y2U8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.3■■■□□ 2.28
LEMD3Q9Y2U8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
LEMD3Q9Y2U8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
LEMD3Q9Y2U8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.29■■■□□ 2.28
LEMD3Q9Y2U8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
LEMD3Q9Y2U8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.28■■■□□ 2.28
LEMD3Q9Y2U8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.28■■■□□ 2.28
LEMD3Q9Y2U8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
LEMD3Q9Y2U8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.28■■■□□ 2.28
LEMD3Q9Y2U8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
LEMD3Q9Y2U8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
LEMD3Q9Y2U8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.27■■■□□ 2.28
LEMD3Q9Y2U8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
LEMD3Q9Y2U8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LEMD3Q9Y2U8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LEMD3Q9Y2U8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LEMD3Q9Y2U8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.25■■■□□ 2.27
LEMD3Q9Y2U8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.25■■■□□ 2.27
LEMD3Q9Y2U8 MIR4281-201ENST00000580852 62 ntBASIC29.25■■■□□ 2.27
LEMD3Q9Y2U8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.24■■■□□ 2.27
LEMD3Q9Y2U8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.24■■■□□ 2.27
LEMD3Q9Y2U8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LEMD3Q9Y2U8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LEMD3Q9Y2U8 KRT16P3-201ENST00000439127 1283 ntBASIC29.23■■■□□ 2.27
LEMD3Q9Y2U8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.23■■■□□ 2.27
LEMD3Q9Y2U8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
LEMD3Q9Y2U8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
LEMD3Q9Y2U8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LEMD3Q9Y2U8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LEMD3Q9Y2U8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
LEMD3Q9Y2U8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms