Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA6Q9UN73 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA6Q9UN73 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.49■■□□□ 1.99
PCDHA6Q9UN73 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA6Q9UN73 BHLHE23-202ENST00000612929 1109 ntBASIC27.49■■□□□ 1.99
PCDHA6Q9UN73 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA6Q9UN73 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.48■■□□□ 1.99
PCDHA6Q9UN73 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.48■■□□□ 1.99
PCDHA6Q9UN73 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHA6Q9UN73 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.46■■□□□ 1.99
PCDHA6Q9UN73 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHA6Q9UN73 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.46■■□□□ 1.99
PCDHA6Q9UN73 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.46■■□□□ 1.99
PCDHA6Q9UN73 AC139795.1-202ENST00000500444 432 ntBASIC27.46■■□□□ 1.99
PCDHA6Q9UN73 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.45■■□□□ 1.99
PCDHA6Q9UN73 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCDHA6Q9UN73 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
PCDHA6Q9UN73 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHA6Q9UN73 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHA6Q9UN73 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHA6Q9UN73 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 RPS2P7-201ENST00000447334 885 ntBASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 AC087393.1-201ENST00000582896 145 ntBASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 AC010980.1-201ENST00000587192 1142 ntBASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA6Q9UN73 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHA6Q9UN73 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHA6Q9UN73 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHA6Q9UN73 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA6Q9UN73 AC074183.2-201ENST00000623112 922 ntBASIC27.42■■□□□ 1.98
PCDHA6Q9UN73 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.42■■□□□ 1.98
PCDHA6Q9UN73 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA6Q9UN73 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHA6Q9UN73 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHA6Q9UN73 KRT18P10-201ENST00000388836 1287 ntBASIC27.4■■□□□ 1.98
PCDHA6Q9UN73 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
PCDHA6Q9UN73 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDHA6Q9UN73 PVT1_1.1-201ENST00000615125 194 ntBASIC27.4■■□□□ 1.98
PCDHA6Q9UN73 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
PCDHA6Q9UN73 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHA6Q9UN73 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHA6Q9UN73 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHA6Q9UN73 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.39■■□□□ 1.97
PCDHA6Q9UN73 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHA6Q9UN73 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHA6Q9UN73 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHA6Q9UN73 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHA6Q9UN73 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA6Q9UN73 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDHA6Q9UN73 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA6Q9UN73 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
PCDHA6Q9UN73 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHA6Q9UN73 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA6Q9UN73 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHA6Q9UN73 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA6Q9UN73 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
PCDHA6Q9UN73 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 LONRF2P2-201ENST00000439212 571 ntBASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 RARRES2P1-201ENST00000474487 481 ntBASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 AC097639.1-201ENST00000565519 1891 ntBASIC27.33■■□□□ 1.97
PCDHA6Q9UN73 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PCDHA6Q9UN73 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA6Q9UN73 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHA6Q9UN73 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.32■■□□□ 1.96
PCDHA6Q9UN73 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
PCDHA6Q9UN73 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms