Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
MKRN1Q9UHC7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
MKRN1Q9UHC7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
MKRN1Q9UHC7 AC026271.2-201ENST00000428091 497 ntBASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.2■■■□□ 2.26
MKRN1Q9UHC7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.19■■■□□ 2.26
MKRN1Q9UHC7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
MKRN1Q9UHC7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
MKRN1Q9UHC7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.18■■■□□ 2.26
MKRN1Q9UHC7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.18■■■□□ 2.26
MKRN1Q9UHC7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.17■■■□□ 2.26
MKRN1Q9UHC7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
MKRN1Q9UHC7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
MKRN1Q9UHC7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
MKRN1Q9UHC7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
MKRN1Q9UHC7 AC087393.1-201ENST00000582896 145 ntBASIC29.16■■■□□ 2.26
MKRN1Q9UHC7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
MKRN1Q9UHC7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
MKRN1Q9UHC7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.15■■■□□ 2.26
MKRN1Q9UHC7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
MKRN1Q9UHC7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.14■■■□□ 2.26
MKRN1Q9UHC7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.14■■■□□ 2.26
MKRN1Q9UHC7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
MKRN1Q9UHC7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.13■■■□□ 2.25
MKRN1Q9UHC7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.13■■■□□ 2.25
MKRN1Q9UHC7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.12■■■□□ 2.25
MKRN1Q9UHC7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
MKRN1Q9UHC7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
MKRN1Q9UHC7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
MKRN1Q9UHC7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
MKRN1Q9UHC7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
MKRN1Q9UHC7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
MKRN1Q9UHC7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
MKRN1Q9UHC7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.1■■■□□ 2.25
MKRN1Q9UHC7 AC142472.1-201ENST00000612013 1741 ntBASIC29.1■■■□□ 2.25
MKRN1Q9UHC7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.1■■■□□ 2.25
MKRN1Q9UHC7 MIR5787-201ENST00000611784 55 ntBASIC29.09■■■□□ 2.25
MKRN1Q9UHC7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
MKRN1Q9UHC7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
MKRN1Q9UHC7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.08■■■□□ 2.25
MKRN1Q9UHC7 AC133561.4-201ENST00000566112 224 ntBASIC29.08■■■□□ 2.25
MKRN1Q9UHC7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
MKRN1Q9UHC7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
MKRN1Q9UHC7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
MKRN1Q9UHC7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
MKRN1Q9UHC7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
MKRN1Q9UHC7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.07■■■□□ 2.24
MKRN1Q9UHC7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
MKRN1Q9UHC7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
MKRN1Q9UHC7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
MKRN1Q9UHC7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.07■■■□□ 2.24
MKRN1Q9UHC7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
MKRN1Q9UHC7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.06■■■□□ 2.24
MKRN1Q9UHC7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
MKRN1Q9UHC7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
MKRN1Q9UHC7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
MKRN1Q9UHC7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
MKRN1Q9UHC7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.04■■■□□ 2.24
MKRN1Q9UHC7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
MKRN1Q9UHC7 AC135279.3-201ENST00000610945 1311 ntBASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.03■■■□□ 2.24
MKRN1Q9UHC7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
MKRN1Q9UHC7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
MKRN1Q9UHC7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
MKRN1Q9UHC7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
MKRN1Q9UHC7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.01■■■□□ 2.23
MKRN1Q9UHC7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.01■■■□□ 2.23
MKRN1Q9UHC7 AL117332.1-201ENST00000622628 974 ntBASIC29.01■■■□□ 2.23
MKRN1Q9UHC7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
MKRN1Q9UHC7 AP004609.3-201ENST00000610705 1884 ntBASIC29■■■□□ 2.23
MKRN1Q9UHC7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
MKRN1Q9UHC7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29■■■□□ 2.23
MKRN1Q9UHC7 RPS2P7-201ENST00000447334 885 ntBASIC29■■■□□ 2.23
MKRN1Q9UHC7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29■■■□□ 2.23
MKRN1Q9UHC7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms