Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.21■■□□□ 1.63
CALR3Q96L12 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.21■■□□□ 1.63
CALR3Q96L12 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CALR3Q96L12 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CALR3Q96L12 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CALR3Q96L12 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CALR3Q96L12 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CALR3Q96L12 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
CALR3Q96L12 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CALR3Q96L12 AC025884.2-201ENST00000553429 711 ntBASIC25.19■■□□□ 1.62
CALR3Q96L12 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CALR3Q96L12 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CALR3Q96L12 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CALR3Q96L12 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CALR3Q96L12 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CALR3Q96L12 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CALR3Q96L12 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.18■■□□□ 1.62
CALR3Q96L12 MIR3960-201ENST00000583311 91 ntBASIC25.18■■□□□ 1.62
CALR3Q96L12 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CALR3Q96L12 SLC6A10P-202ENST00000431994 2058 ntBASIC25.17■■□□□ 1.62
CALR3Q96L12 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CALR3Q96L12 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CALR3Q96L12 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.16■■□□□ 1.62
CALR3Q96L12 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CALR3Q96L12 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
CALR3Q96L12 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.16■■□□□ 1.62
CALR3Q96L12 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CALR3Q96L12 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CALR3Q96L12 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CALR3Q96L12 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CALR3Q96L12 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CALR3Q96L12 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.15■■□□□ 1.62
CALR3Q96L12 AC016575.1-201ENST00000607026 382 ntBASIC25.15■■□□□ 1.62
CALR3Q96L12 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.15■■□□□ 1.62
CALR3Q96L12 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CALR3Q96L12 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CALR3Q96L12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.15■■□□□ 1.62
CALR3Q96L12 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.15■■□□□ 1.62
CALR3Q96L12 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CALR3Q96L12 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CALR3Q96L12 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.14■■□□□ 1.62
CALR3Q96L12 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
CALR3Q96L12 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CALR3Q96L12 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CALR3Q96L12 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CALR3Q96L12 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CALR3Q96L12 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CALR3Q96L12 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CALR3Q96L12 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CALR3Q96L12 AL157400.5-201ENST00000507624 621 ntBASIC25.13■■□□□ 1.61
CALR3Q96L12 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.13■■□□□ 1.61
CALR3Q96L12 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CALR3Q96L12 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CALR3Q96L12 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.12■■□□□ 1.61
CALR3Q96L12 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.12■■□□□ 1.61
CALR3Q96L12 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.12■■□□□ 1.61
CALR3Q96L12 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CALR3Q96L12 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CALR3Q96L12 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CALR3Q96L12 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CALR3Q96L12 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CALR3Q96L12 AC141586.4-201ENST00000624558 1573 ntBASIC25.11■■□□□ 1.61
CALR3Q96L12 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.11■■□□□ 1.61
CALR3Q96L12 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CALR3Q96L12 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CALR3Q96L12 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.11■■□□□ 1.61
CALR3Q96L12 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.11■■□□□ 1.61
CALR3Q96L12 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CALR3Q96L12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CALR3Q96L12 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.1■■□□□ 1.61
CALR3Q96L12 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CALR3Q96L12 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CALR3Q96L12 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CALR3Q96L12 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CALR3Q96L12 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CALR3Q96L12 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CALR3Q96L12 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CALR3Q96L12 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CALR3Q96L12 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CALR3Q96L12 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.09■■□□□ 1.61
CALR3Q96L12 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
CALR3Q96L12 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CALR3Q96L12 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CALR3Q96L12 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CALR3Q96L12 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CALR3Q96L12 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CALR3Q96L12 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CALR3Q96L12 AC060814.1-201ENST00000554326 538 ntBASIC25.08■■□□□ 1.61
CALR3Q96L12 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms