Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB39BQ96DA2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB39BQ96DA2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB39BQ96DA2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB39BQ96DA2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB39BQ96DA2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB39BQ96DA2 AP004609.3-201ENST00000610705 1884 ntBASIC20.27■□□□□ 0.84
RAB39BQ96DA2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB39BQ96DA2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB39BQ96DA2 AC142472.1-201ENST00000612013 1741 ntBASIC20.27■□□□□ 0.83
RAB39BQ96DA2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB39BQ96DA2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
RAB39BQ96DA2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB39BQ96DA2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB39BQ96DA2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB39BQ96DA2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB39BQ96DA2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAB39BQ96DA2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB39BQ96DA2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB39BQ96DA2 AC010980.1-201ENST00000587192 1142 ntBASIC20.22■□□□□ 0.83
RAB39BQ96DA2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB39BQ96DA2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB39BQ96DA2 KRT18P10-201ENST00000388836 1287 ntBASIC20.21■□□□□ 0.83
RAB39BQ96DA2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB39BQ96DA2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB39BQ96DA2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RAB39BQ96DA2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB39BQ96DA2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB39BQ96DA2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 YBX1P4-201ENST00000392794 808 ntBASIC20.2■□□□□ 0.82
RAB39BQ96DA2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB39BQ96DA2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB39BQ96DA2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB39BQ96DA2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RAB39BQ96DA2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAB39BQ96DA2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB39BQ96DA2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB39BQ96DA2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
RAB39BQ96DA2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB39BQ96DA2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB39BQ96DA2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB39BQ96DA2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB39BQ96DA2 AC093323.1-202ENST00000635031 2045 ntBASIC20.15■□□□□ 0.82
RAB39BQ96DA2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB39BQ96DA2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms