Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 AC008813.1-201ENST00000536597 885 ntBASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC71LQ8N9Z2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC71LQ8N9Z2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC71LQ8N9Z2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71LQ8N9Z2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71LQ8N9Z2 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC71LQ8N9Z2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC71LQ8N9Z2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71LQ8N9Z2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71LQ8N9Z2 AC097639.1-201ENST00000565519 1891 ntBASIC19.72■□□□□ 0.75
CCDC71LQ8N9Z2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC71LQ8N9Z2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71LQ8N9Z2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC71LQ8N9Z2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 MIR219A2-201ENST00000608502 1504 ntBASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC71LQ8N9Z2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 AL162393.1-201ENST00000437852 946 ntBASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 AC148477.6-201ENST00000623746 465 ntBASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 AC012676.1-201ENST00000574705 1949 ntBASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 AC141586.4-201ENST00000624558 1573 ntBASIC19.7■□□□□ 0.74
CCDC71LQ8N9Z2 AL359504.2-201ENST00000605506 1601 ntBASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 AL359258.2-201ENST00000564063 1566 ntBASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 LINC00543-201ENST00000567234 1845 ntBASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC71LQ8N9Z2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC71LQ8N9Z2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC71LQ8N9Z2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC71LQ8N9Z2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC71LQ8N9Z2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC71LQ8N9Z2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC71LQ8N9Z2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71LQ8N9Z2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71LQ8N9Z2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC71LQ8N9Z2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71LQ8N9Z2 SLC6A10P-202ENST00000431994 2058 ntBASIC19.63■□□□□ 0.73
CCDC71LQ8N9Z2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71LQ8N9Z2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC71LQ8N9Z2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC71LQ8N9Z2 LINC01971-201ENST00000617888 1048 ntBASIC19.63■□□□□ 0.73
CCDC71LQ8N9Z2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC71LQ8N9Z2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms