Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.43■□□□□ 0.86
EFNB3Q15768 AL031848.2-201ENST00000607670 837 ntBASIC20.43■□□□□ 0.86
EFNB3Q15768 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.43■□□□□ 0.86
EFNB3Q15768 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EFNB3Q15768 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
EFNB3Q15768 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFNB3Q15768 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFNB3Q15768 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFNB3Q15768 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
EFNB3Q15768 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EFNB3Q15768 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.42■□□□□ 0.86
EFNB3Q15768 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.42■□□□□ 0.86
EFNB3Q15768 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFNB3Q15768 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EFNB3Q15768 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EFNB3Q15768 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
EFNB3Q15768 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.41■□□□□ 0.86
EFNB3Q15768 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.41■□□□□ 0.86
EFNB3Q15768 AC009299.2-201ENST00000482477 511 ntBASIC20.41■□□□□ 0.86
EFNB3Q15768 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
EFNB3Q15768 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.41■□□□□ 0.86
EFNB3Q15768 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EFNB3Q15768 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EFNB3Q15768 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EFNB3Q15768 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.4■□□□□ 0.86
EFNB3Q15768 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EFNB3Q15768 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.39■□□□□ 0.86
EFNB3Q15768 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
EFNB3Q15768 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EFNB3Q15768 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EFNB3Q15768 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EFNB3Q15768 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EFNB3Q15768 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.39■□□□□ 0.85
EFNB3Q15768 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EFNB3Q15768 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EFNB3Q15768 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EFNB3Q15768 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EFNB3Q15768 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EFNB3Q15768 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.38■□□□□ 0.85
EFNB3Q15768 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EFNB3Q15768 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EFNB3Q15768 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EFNB3Q15768 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EFNB3Q15768 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.37■□□□□ 0.85
EFNB3Q15768 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
EFNB3Q15768 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.37■□□□□ 0.85
EFNB3Q15768 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
EFNB3Q15768 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EFNB3Q15768 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EFNB3Q15768 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
EFNB3Q15768 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EFNB3Q15768 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.36■□□□□ 0.85
EFNB3Q15768 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.35■□□□□ 0.85
EFNB3Q15768 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EFNB3Q15768 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EFNB3Q15768 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EFNB3Q15768 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.35■□□□□ 0.85
EFNB3Q15768 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.35■□□□□ 0.85
EFNB3Q15768 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
EFNB3Q15768 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.35■□□□□ 0.85
EFNB3Q15768 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EFNB3Q15768 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EFNB3Q15768 AL592295.1-201ENST00000400984 884 ntBASIC20.34■□□□□ 0.85
EFNB3Q15768 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EFNB3Q15768 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EFNB3Q15768 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EFNB3Q15768 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EFNB3Q15768 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EFNB3Q15768 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.33■□□□□ 0.85
EFNB3Q15768 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EFNB3Q15768 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
EFNB3Q15768 KRT18P24-201ENST00000344739 1156 ntBASIC20.33■□□□□ 0.85
EFNB3Q15768 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EFNB3Q15768 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
EFNB3Q15768 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
EFNB3Q15768 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EFNB3Q15768 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.32■□□□□ 0.84
EFNB3Q15768 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EFNB3Q15768 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EFNB3Q15768 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EFNB3Q15768 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.32■□□□□ 0.84
EFNB3Q15768 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.31■□□□□ 0.84
EFNB3Q15768 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EFNB3Q15768 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EFNB3Q15768 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EFNB3Q15768 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EFNB3Q15768 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EFNB3Q15768 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
EFNB3Q15768 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EFNB3Q15768 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.31■□□□□ 0.84
EFNB3Q15768 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EFNB3Q15768 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms