Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX6-1P78426 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX6-1P78426 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX6-1P78426 AL356441.2-201ENST00000443009 864 ntBASIC20.9■□□□□ 0.94
NKX6-1P78426 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NKX6-1P78426 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.9■□□□□ 0.94
NKX6-1P78426 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NKX6-1P78426 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX6-1P78426 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NKX6-1P78426 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX6-1P78426 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.89■□□□□ 0.93
NKX6-1P78426 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX6-1P78426 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX6-1P78426 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX6-1P78426 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX6-1P78426 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX6-1P78426 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.88■□□□□ 0.93
NKX6-1P78426 AC103724.3-201ENST00000564481 992 ntBASIC20.88■□□□□ 0.93
NKX6-1P78426 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX6-1P78426 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
NKX6-1P78426 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.87■□□□□ 0.93
NKX6-1P78426 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NKX6-1P78426 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX6-1P78426 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX6-1P78426 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NKX6-1P78426 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-1P78426 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-1P78426 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX6-1P78426 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX6-1P78426 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-1P78426 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.86■□□□□ 0.93
NKX6-1P78426 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX6-1P78426 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX6-1P78426 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NKX6-1P78426 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-1P78426 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-1P78426 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-1P78426 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NKX6-1P78426 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-1P78426 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.85■□□□□ 0.93
NKX6-1P78426 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-1P78426 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX6-1P78426 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NKX6-1P78426 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX6-1P78426 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX6-1P78426 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX6-1P78426 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX6-1P78426 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NKX6-1P78426 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX6-1P78426 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NKX6-1P78426 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NKX6-1P78426 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NKX6-1P78426 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NKX6-1P78426 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NKX6-1P78426 AL121749.1-202ENST00000609313 2153 ntBASIC20.83■□□□□ 0.92
NKX6-1P78426 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NKX6-1P78426 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NKX6-1P78426 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
NKX6-1P78426 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX6-1P78426 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.82■□□□□ 0.92
NKX6-1P78426 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.82■□□□□ 0.92
NKX6-1P78426 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
NKX6-1P78426 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX6-1P78426 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX6-1P78426 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX6-1P78426 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX6-1P78426 AC239859.2-201ENST00000444165 318 ntBASIC20.81■□□□□ 0.92
NKX6-1P78426 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NKX6-1P78426 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX6-1P78426 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.81■□□□□ 0.92
NKX6-1P78426 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.81■□□□□ 0.92
NKX6-1P78426 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-1P78426 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-1P78426 MIR935-201ENST00000401179 91 ntBASIC20.8■□□□□ 0.92
NKX6-1P78426 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.8■□□□□ 0.92
NKX6-1P78426 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-1P78426 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-1P78426 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.8■□□□□ 0.92
NKX6-1P78426 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NKX6-1P78426 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX6-1P78426 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX6-1P78426 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NKX6-1P78426 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.79■□□□□ 0.92
NKX6-1P78426 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
NKX6-1P78426 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX6-1P78426 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NKX6-1P78426 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms