Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDC42P60953 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CDC42P60953 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42P60953 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.71■■□□□ 1.07
CDC42P60953 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42P60953 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDC42P60953 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.7■■□□□ 1.06
CDC42P60953 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDC42P60953 AC097639.1-201ENST00000565519 1891 ntBASIC21.7■■□□□ 1.06
CDC42P60953 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42P60953 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.7■■□□□ 1.06
CDC42P60953 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42P60953 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42P60953 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42P60953 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42P60953 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42P60953 DUX4L29-201ENST00000425409 679 ntBASIC21.69■■□□□ 1.06
CDC42P60953 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDC42P60953 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42P60953 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDC42P60953 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDC42P60953 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42P60953 LINC00543-201ENST00000567234 1845 ntBASIC21.69■■□□□ 1.06
CDC42P60953 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CDC42P60953 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42P60953 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42P60953 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC42P60953 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDC42P60953 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.67■■□□□ 1.06
CDC42P60953 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42P60953 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 AC008813.1-201ENST00000536597 885 ntBASIC21.66■■□□□ 1.06
CDC42P60953 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42P60953 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42P60953 AL359504.2-201ENST00000605506 1601 ntBASIC21.66■■□□□ 1.06
CDC42P60953 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDC42P60953 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CDC42P60953 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42P60953 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42P60953 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42P60953 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42P60953 SLC6A10P-202ENST00000431994 2058 ntBASIC21.65■■□□□ 1.06
CDC42P60953 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42P60953 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42P60953 AC141586.4-201ENST00000624558 1573 ntBASIC21.65■■□□□ 1.06
CDC42P60953 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42P60953 MIR219A2-201ENST00000608502 1504 ntBASIC21.65■■□□□ 1.06
CDC42P60953 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.64■■□□□ 1.06
CDC42P60953 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42P60953 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDC42P60953 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42P60953 AL359258.2-201ENST00000564063 1566 ntBASIC21.63■■□□□ 1.05
CDC42P60953 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42P60953 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42P60953 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42P60953 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42P60953 AL162393.1-201ENST00000437852 946 ntBASIC21.62■■□□□ 1.05
CDC42P60953 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42P60953 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42P60953 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42P60953 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42P60953 AC148477.6-201ENST00000623746 465 ntBASIC21.61■■□□□ 1.05
CDC42P60953 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42P60953 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42P60953 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42P60953 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42P60953 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CDC42P60953 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42P60953 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDC42P60953 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42P60953 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42P60953 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42P60953 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CDC42P60953 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42P60953 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CDC42P60953 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CDC42P60953 AC068473.5-201ENST00000616428 2072 ntBASIC21.59■■□□□ 1.05
CDC42P60953 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42P60953 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42P60953 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42P60953 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms