Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
C4BPAP04003 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
C4BPAP04003 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
C4BPAP04003 KRT18P10-201ENST00000388836 1287 ntBASIC25.79■■□□□ 1.72
C4BPAP04003 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
C4BPAP04003 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
C4BPAP04003 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
C4BPAP04003 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.78■■□□□ 1.72
C4BPAP04003 ATP5G2P3-201ENST00000429083 425 ntBASIC25.78■■□□□ 1.72
C4BPAP04003 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
C4BPAP04003 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
C4BPAP04003 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.77■■□□□ 1.72
C4BPAP04003 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
C4BPAP04003 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
C4BPAP04003 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
C4BPAP04003 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
C4BPAP04003 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.77■■□□□ 1.72
C4BPAP04003 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
C4BPAP04003 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
C4BPAP04003 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
C4BPAP04003 DUX4L18-201ENST00000553347 1267 ntBASIC25.76■■□□□ 1.71
C4BPAP04003 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.76■■□□□ 1.71
C4BPAP04003 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
C4BPAP04003 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.76■■□□□ 1.71
C4BPAP04003 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
C4BPAP04003 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
C4BPAP04003 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
C4BPAP04003 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
C4BPAP04003 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.75■■□□□ 1.71
C4BPAP04003 RPS2P7-201ENST00000447334 885 ntBASIC25.75■■□□□ 1.71
C4BPAP04003 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.75■■□□□ 1.71
C4BPAP04003 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
C4BPAP04003 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.75■■□□□ 1.71
C4BPAP04003 AC012354.3-201ENST00000623734 483 ntBASIC25.75■■□□□ 1.71
C4BPAP04003 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
C4BPAP04003 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
C4BPAP04003 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
C4BPAP04003 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
C4BPAP04003 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
C4BPAP04003 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.74■■□□□ 1.71
C4BPAP04003 AC087393.1-201ENST00000582896 145 ntBASIC25.74■■□□□ 1.71
C4BPAP04003 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
C4BPAP04003 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
C4BPAP04003 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
C4BPAP04003 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
C4BPAP04003 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
C4BPAP04003 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.73■■□□□ 1.71
C4BPAP04003 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
C4BPAP04003 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
C4BPAP04003 TSPY13P-201ENST00000338964 914 ntBASIC25.72■■□□□ 1.71
C4BPAP04003 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.72■■□□□ 1.71
C4BPAP04003 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
C4BPAP04003 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
C4BPAP04003 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
C4BPAP04003 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
C4BPAP04003 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
C4BPAP04003 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
C4BPAP04003 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.71■■□□□ 1.71
C4BPAP04003 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
C4BPAP04003 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
C4BPAP04003 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
C4BPAP04003 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
C4BPAP04003 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.69■■□□□ 1.7
C4BPAP04003 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
C4BPAP04003 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.69■■□□□ 1.7
C4BPAP04003 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
C4BPAP04003 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.68■■□□□ 1.7
C4BPAP04003 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
C4BPAP04003 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
C4BPAP04003 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.68■■□□□ 1.7
C4BPAP04003 AL033527.3-201ENST00000566366 1196 ntBASIC25.68■■□□□ 1.7
C4BPAP04003 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
C4BPAP04003 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.68■■□□□ 1.7
C4BPAP04003 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
C4BPAP04003 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
C4BPAP04003 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
C4BPAP04003 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
C4BPAP04003 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
C4BPAP04003 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
C4BPAP04003 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.67■■□□□ 1.7
C4BPAP04003 AC020928.2-201ENST00000588717 2197 ntBASIC25.67■■□□□ 1.7
C4BPAP04003 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.67■■□□□ 1.7
C4BPAP04003 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.67■■□□□ 1.7
C4BPAP04003 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
C4BPAP04003 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
C4BPAP04003 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
C4BPAP04003 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.66■■□□□ 1.7
C4BPAP04003 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
C4BPAP04003 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.65■■□□□ 1.7
C4BPAP04003 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
C4BPAP04003 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
C4BPAP04003 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
C4BPAP04003 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms