Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HLA-DQB1P01920 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB1P01920 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DQB1P01920 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DQB1P01920 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQB1P01920 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB1P01920 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB1P01920 MIR3665-201ENST00000578708 105 ntBASIC20.67■□□□□ 0.9
HLA-DQB1P01920 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB1P01920 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB1P01920 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB1P01920 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQB1P01920 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB1P01920 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB1P01920 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB1P01920 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQB1P01920 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQB1P01920 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQB1P01920 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQB1P01920 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQB1P01920 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DQB1P01920 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DQB1P01920 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DQB1P01920 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB1P01920 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HLA-DQB1P01920 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DQB1P01920 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB1P01920 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB1P01920 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB1P01920 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB1P01920 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB1P01920 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DQB1P01920 AL117328.2-201ENST00000624617 1940 ntBASIC20.61■□□□□ 0.89
HLA-DQB1P01920 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DQB1P01920 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB1P01920 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB1P01920 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB1P01920 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.59■□□□□ 0.89
HLA-DQB1P01920 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DQB1P01920 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.59■□□□□ 0.89
HLA-DQB1P01920 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB1P01920 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
HLA-DQB1P01920 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB1P01920 AP006261.1-201ENST00000584783 668 ntBASIC20.58■□□□□ 0.89
HLA-DQB1P01920 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DQB1P01920 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HLA-DQB1P01920 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DQB1P01920 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB1P01920 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB1P01920 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.56■□□□□ 0.88
HLA-DQB1P01920 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB1P01920 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB1P01920 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HLA-DQB1P01920 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms