Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.68■■□□□ 1.86
CD4P01730 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.68■■□□□ 1.86
CD4P01730 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CD4P01730 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CD4P01730 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CD4P01730 TSPY9P-201ENST00000440215 945 ntBASIC26.67■■□□□ 1.86
CD4P01730 TSPY11P-201ENST00000442607 1045 ntBASIC26.67■■□□□ 1.86
CD4P01730 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.67■■□□□ 1.86
CD4P01730 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.67■■□□□ 1.86
CD4P01730 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.66■■□□□ 1.86
CD4P01730 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CD4P01730 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CD4P01730 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CD4P01730 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CD4P01730 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CD4P01730 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CD4P01730 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CD4P01730 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CD4P01730 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CD4P01730 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.64■■□□□ 1.86
CD4P01730 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.64■■□□□ 1.86
CD4P01730 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.64■■□□□ 1.86
CD4P01730 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.64■■□□□ 1.86
CD4P01730 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.64■■□□□ 1.86
CD4P01730 AL139246.5-201ENST00000606645 996 ntBASIC26.64■■□□□ 1.86
CD4P01730 AC092028.1-203ENST00000608262 953 ntBASIC26.64■■□□□ 1.86
CD4P01730 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
CD4P01730 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CD4P01730 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.63■■□□□ 1.85
CD4P01730 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CD4P01730 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CD4P01730 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
CD4P01730 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.62■■□□□ 1.85
CD4P01730 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.62■■□□□ 1.85
CD4P01730 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.62■■□□□ 1.85
CD4P01730 AC131281.2-201ENST00000520478 145 ntBASIC26.62■■□□□ 1.85
CD4P01730 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CD4P01730 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CD4P01730 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CD4P01730 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.61■■□□□ 1.85
CD4P01730 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.61■■□□□ 1.85
CD4P01730 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CD4P01730 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.6■■□□□ 1.85
CD4P01730 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CD4P01730 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CD4P01730 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CD4P01730 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CD4P01730 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.6■■□□□ 1.85
CD4P01730 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CD4P01730 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CD4P01730 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
CD4P01730 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CD4P01730 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD4P01730 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD4P01730 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.59■■□□□ 1.85
CD4P01730 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.59■■□□□ 1.85
CD4P01730 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.59■■□□□ 1.85
CD4P01730 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CD4P01730 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CD4P01730 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CD4P01730 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.58■■□□□ 1.85
CD4P01730 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.58■■□□□ 1.85
CD4P01730 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.58■■□□□ 1.85
CD4P01730 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CD4P01730 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
CD4P01730 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CD4P01730 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
CD4P01730 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CD4P01730 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.57■■□□□ 1.84
CD4P01730 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.56■■□□□ 1.84
CD4P01730 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.56■■□□□ 1.84
CD4P01730 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.56■■□□□ 1.84
CD4P01730 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CD4P01730 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
CD4P01730 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.55■■□□□ 1.84
CD4P01730 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CD4P01730 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CD4P01730 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.54■■□□□ 1.84
CD4P01730 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CD4P01730 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.54■■□□□ 1.84
CD4P01730 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.54■■□□□ 1.84
CD4P01730 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CD4P01730 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CD4P01730 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CD4P01730 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CD4P01730 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.53■■□□□ 1.84
CD4P01730 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CD4P01730 MIR4281-201ENST00000580852 62 ntBASIC26.53■■□□□ 1.84
CD4P01730 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CD4P01730 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CD4P01730 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CD4P01730 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CD4P01730 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms