Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC010501.1-201ENST00000606270 1962 ntBASIC25.29■■□□□ 1.64
BEST1O76090 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
BEST1O76090 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.29■■□□□ 1.64
BEST1O76090 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.29■■□□□ 1.64
BEST1O76090 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BEST1O76090 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.28■■□□□ 1.64
BEST1O76090 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
BEST1O76090 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.28■■□□□ 1.64
BEST1O76090 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.27■■□□□ 1.64
BEST1O76090 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BEST1O76090 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
BEST1O76090 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.27■■□□□ 1.64
BEST1O76090 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
BEST1O76090 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
BEST1O76090 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
BEST1O76090 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
BEST1O76090 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BEST1O76090 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
BEST1O76090 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
BEST1O76090 AC074183.2-201ENST00000623112 922 ntBASIC25.25■■□□□ 1.63
BEST1O76090 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
BEST1O76090 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.24■■□□□ 1.63
BEST1O76090 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.24■■□□□ 1.63
BEST1O76090 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BEST1O76090 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BEST1O76090 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BEST1O76090 LONRF2P2-201ENST00000439212 571 ntBASIC25.24■■□□□ 1.63
BEST1O76090 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
BEST1O76090 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.24■■□□□ 1.63
BEST1O76090 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.23■■□□□ 1.63
BEST1O76090 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
BEST1O76090 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.23■■□□□ 1.63
BEST1O76090 RARRES2P1-201ENST00000474487 481 ntBASIC25.23■■□□□ 1.63
BEST1O76090 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.23■■□□□ 1.63
BEST1O76090 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
BEST1O76090 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
BEST1O76090 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BEST1O76090 KRT18P10-201ENST00000388836 1287 ntBASIC25.22■■□□□ 1.63
BEST1O76090 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.22■■□□□ 1.63
BEST1O76090 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
BEST1O76090 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BEST1O76090 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
BEST1O76090 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
BEST1O76090 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
BEST1O76090 AC103834.1-201ENST00000520383 144 ntBASIC25.21■■□□□ 1.63
BEST1O76090 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.21■■□□□ 1.63
BEST1O76090 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
BEST1O76090 KRT8P33-201ENST00000508125 1423 ntBASIC25.2■■□□□ 1.63
BEST1O76090 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.2■■□□□ 1.63
BEST1O76090 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
BEST1O76090 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
BEST1O76090 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
BEST1O76090 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.2■■□□□ 1.62
BEST1O76090 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
BEST1O76090 DUSP8P4-201ENST00000399538 1761 ntBASIC25.2■■□□□ 1.62
BEST1O76090 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
BEST1O76090 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.19■■□□□ 1.62
BEST1O76090 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.19■■□□□ 1.62
BEST1O76090 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
BEST1O76090 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
BEST1O76090 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.18■■□□□ 1.62
BEST1O76090 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
BEST1O76090 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.18■■□□□ 1.62
BEST1O76090 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
BEST1O76090 AC145676.1-201ENST00000514988 2004 ntBASIC25.17■■□□□ 1.62
BEST1O76090 AC019171.1-201ENST00000601251 1056 ntBASIC25.17■■□□□ 1.62
BEST1O76090 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.17■■□□□ 1.62
BEST1O76090 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
BEST1O76090 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BEST1O76090 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BEST1O76090 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
BEST1O76090 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
BEST1O76090 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BEST1O76090 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
BEST1O76090 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
BEST1O76090 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.15■■□□□ 1.62
BEST1O76090 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
BEST1O76090 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
BEST1O76090 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.15■■□□□ 1.62
BEST1O76090 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.14■■□□□ 1.62
BEST1O76090 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.14■■□□□ 1.62
BEST1O76090 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.14■■□□□ 1.62
BEST1O76090 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
BEST1O76090 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
BEST1O76090 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
BEST1O76090 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
BEST1O76090 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
BEST1O76090 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
BEST1O76090 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
BEST1O76090 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
BEST1O76090 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
BEST1O76090 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
BEST1O76090 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
BEST1O76090 MIR4508-201ENST00000584178 70 ntBASIC25.12■■□□□ 1.61
BEST1O76090 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
BEST1O76090 AC097639.1-201ENST00000565519 1891 ntBASIC25.12■■□□□ 1.61
BEST1O76090 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.12■■□□□ 1.61
BEST1O76090 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
BEST1O76090 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms