Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCN1O60741 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HCN1O60741 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HCN1O60741 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.18■■□□□ 1.14
HCN1O60741 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HCN1O60741 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
HCN1O60741 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
HCN1O60741 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.17■■□□□ 1.14
HCN1O60741 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HCN1O60741 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
HCN1O60741 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
HCN1O60741 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCN1O60741 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HCN1O60741 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HCN1O60741 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
HCN1O60741 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.16■■□□□ 1.14
HCN1O60741 AC093323.1-202ENST00000635031 2045 ntBASIC22.16■■□□□ 1.14
HCN1O60741 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCN1O60741 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.15■■□□□ 1.14
HCN1O60741 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCN1O60741 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCN1O60741 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCN1O60741 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.15■■□□□ 1.14
HCN1O60741 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
HCN1O60741 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.15■■□□□ 1.14
HCN1O60741 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCN1O60741 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
HCN1O60741 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.14■■□□□ 1.14
HCN1O60741 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
HCN1O60741 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
HCN1O60741 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.14■■□□□ 1.13
HCN1O60741 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HCN1O60741 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.14■■□□□ 1.13
HCN1O60741 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCN1O60741 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCN1O60741 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCN1O60741 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCN1O60741 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCN1O60741 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.13■■□□□ 1.13
HCN1O60741 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCN1O60741 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HCN1O60741 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCN1O60741 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCN1O60741 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCN1O60741 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.12■■□□□ 1.13
HCN1O60741 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HCN1O60741 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HCN1O60741 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 DUX4L9-201ENST00000449051 1259 ntBASIC22.11■■□□□ 1.13
HCN1O60741 DUX4L18-201ENST00000553347 1267 ntBASIC22.11■■□□□ 1.13
HCN1O60741 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.11■■□□□ 1.13
HCN1O60741 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.11■■□□□ 1.13
HCN1O60741 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HCN1O60741 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.1■■□□□ 1.13
HCN1O60741 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.1■■□□□ 1.13
HCN1O60741 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCN1O60741 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCN1O60741 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCN1O60741 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HCN1O60741 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.1■■□□□ 1.13
HCN1O60741 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCN1O60741 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.09■■□□□ 1.13
HCN1O60741 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.09■■□□□ 1.13
HCN1O60741 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCN1O60741 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.09■■□□□ 1.13
HCN1O60741 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HCN1O60741 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCN1O60741 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.08■■□□□ 1.13
HCN1O60741 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCN1O60741 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HCN1O60741 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.08■■□□□ 1.13
HCN1O60741 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCN1O60741 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
HCN1O60741 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
HCN1O60741 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
HCN1O60741 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
HCN1O60741 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.08■■□□□ 1.12
HCN1O60741 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HCN1O60741 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
HCN1O60741 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HCN1O60741 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.07■■□□□ 1.12
HCN1O60741 AC010501.1-201ENST00000606270 1962 ntBASIC22.07■■□□□ 1.12
HCN1O60741 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.07■■□□□ 1.12
HCN1O60741 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.07■■□□□ 1.12
HCN1O60741 AC018755.3-202ENST00000596210 929 ntBASIC22.07■■□□□ 1.12
HCN1O60741 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
HCN1O60741 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCN1O60741 MIR6765-201ENST00000614092 87 ntBASIC22.06■■□□□ 1.12
HCN1O60741 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HCN1O60741 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCN1O60741 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HCN1O60741 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.05■■□□□ 1.12
HCN1O60741 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms