Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-1A0A0B4J241 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-1A0A0B4J241 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-1A0A0B4J241 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV13-1A0A0B4J241 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV13-1A0A0B4J241 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-1A0A0B4J241 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-1A0A0B4J241 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV13-1A0A0B4J241 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L13-201ENST00000554103 1267 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L15-201ENST00000611059 1267 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L23-201ENST00000615195 1269 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L24-201ENST00000617576 1269 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L22-201ENST00000618238 1269 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L20-201ENST00000619712 1269 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L21-201ENST00000622058 1269 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L10-201ENST00000622460 1267 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 DUX4L25-201ENST00000624915 1269 ntBASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-1A0A0B4J241 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV13-1A0A0B4J241 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 AL359504.2-201ENST00000605506 1601 ntBASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV13-1A0A0B4J241 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 AC148477.6-201ENST00000623746 465 ntBASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV13-1A0A0B4J241 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV13-1A0A0B4J241 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV13-1A0A0B4J241 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms