Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV1A0A0A0MS02 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRGV1A0A0A0MS02 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV1A0A0A0MS02 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV1A0A0A0MS02 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV1A0A0A0MS02 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.22■□□□□ 0.35
TRGV1A0A0A0MS02 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TRGV1A0A0A0MS02 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.22■□□□□ 0.35
TRGV1A0A0A0MS02 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRGV1A0A0A0MS02 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV1A0A0A0MS02 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV1A0A0A0MS02 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV1A0A0A0MS02 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV1A0A0A0MS02 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV1A0A0A0MS02 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.21■□□□□ 0.34
TRGV1A0A0A0MS02 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 RNF126P1-201ENST00000567452 1320 ntBASIC17.2■□□□□ 0.34
TRGV1A0A0A0MS02 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRGV1A0A0A0MS02 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRGV1A0A0A0MS02 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV1A0A0A0MS02 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV1A0A0A0MS02 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV1A0A0A0MS02 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRGV1A0A0A0MS02 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRGV1A0A0A0MS02 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV1A0A0A0MS02 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV1A0A0A0MS02 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV1A0A0A0MS02 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV1A0A0A0MS02 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 AC097639.1-201ENST00000565519 1891 ntBASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV1A0A0A0MS02 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV1A0A0A0MS02 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV1A0A0A0MS02 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms