Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HRH3Q9Y5N1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HRH3Q9Y5N1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HRH3Q9Y5N1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HRH3Q9Y5N1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.1■■□□□ 1.13
HRH3Q9Y5N1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HRH3Q9Y5N1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HRH3Q9Y5N1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.08■■□□□ 1.13
HRH3Q9Y5N1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HRH3Q9Y5N1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.08■■□□□ 1.12
HRH3Q9Y5N1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
HRH3Q9Y5N1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HRH3Q9Y5N1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HRH3Q9Y5N1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HRH3Q9Y5N1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
HRH3Q9Y5N1 AC010980.1-201ENST00000587192 1142 ntBASIC22.05■■□□□ 1.12
HRH3Q9Y5N1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.05■■□□□ 1.12
HRH3Q9Y5N1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HRH3Q9Y5N1 ERN1-208ENST00000606895 2068 ntBASIC22.05■■□□□ 1.12
HRH3Q9Y5N1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HRH3Q9Y5N1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.04■■□□□ 1.12
HRH3Q9Y5N1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HRH3Q9Y5N1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HRH3Q9Y5N1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.03■■□□□ 1.12
HRH3Q9Y5N1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.02■■□□□ 1.12
HRH3Q9Y5N1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.02■■□□□ 1.12
HRH3Q9Y5N1 BHLHE23-202ENST00000612929 1109 ntBASIC22.02■■□□□ 1.12
HRH3Q9Y5N1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.02■■□□□ 1.12
HRH3Q9Y5N1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HRH3Q9Y5N1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HRH3Q9Y5N1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.01■■□□□ 1.11
HRH3Q9Y5N1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.01■■□□□ 1.11
HRH3Q9Y5N1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HRH3Q9Y5N1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.01■■□□□ 1.11
HRH3Q9Y5N1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HRH3Q9Y5N1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22■■□□□ 1.11
HRH3Q9Y5N1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HRH3Q9Y5N1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22■■□□□ 1.11
HRH3Q9Y5N1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22■■□□□ 1.11
HRH3Q9Y5N1 AL451085.2-201ENST00000605085 799 ntBASIC22■■□□□ 1.11
HRH3Q9Y5N1 MIR6765-201ENST00000614092 87 ntBASIC22■■□□□ 1.11
HRH3Q9Y5N1 PVT1_1.1-201ENST00000615125 194 ntBASIC22■■□□□ 1.11
HRH3Q9Y5N1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HRH3Q9Y5N1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.99■■□□□ 1.11
HRH3Q9Y5N1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.98■■□□□ 1.11
HRH3Q9Y5N1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.98■■□□□ 1.11
HRH3Q9Y5N1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms