Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGC3Q9UN70 AC133552.2-201ENST00000619106 1032 ntBASIC25.48■■□□□ 1.67
PCDHGC3Q9UN70 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
PCDHGC3Q9UN70 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGC3Q9UN70 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDHGC3Q9UN70 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
PCDHGC3Q9UN70 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDHGC3Q9UN70 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.45■■□□□ 1.67
PCDHGC3Q9UN70 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDHGC3Q9UN70 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGC3Q9UN70 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGC3Q9UN70 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
PCDHGC3Q9UN70 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC3Q9UN70 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.43■■□□□ 1.66
PCDHGC3Q9UN70 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
PCDHGC3Q9UN70 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHGC3Q9UN70 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC3Q9UN70 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC3Q9UN70 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGC3Q9UN70 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.42■■□□□ 1.66
PCDHGC3Q9UN70 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGC3Q9UN70 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGC3Q9UN70 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.42■■□□□ 1.66
PCDHGC3Q9UN70 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGC3Q9UN70 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGC3Q9UN70 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGC3Q9UN70 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.41■■□□□ 1.66
PCDHGC3Q9UN70 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
PCDHGC3Q9UN70 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHGC3Q9UN70 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC3Q9UN70 AC097639.1-201ENST00000565519 1891 ntBASIC25.4■■□□□ 1.66
PCDHGC3Q9UN70 AC020928.2-201ENST00000588717 2197 ntBASIC25.39■■□□□ 1.66
PCDHGC3Q9UN70 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC3Q9UN70 AL592293.1-201ENST00000502889 1188 ntBASIC25.39■■□□□ 1.66
PCDHGC3Q9UN70 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHGC3Q9UN70 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 U85056.1-201ENST00000616429 682 ntBASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHGC3Q9UN70 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC3Q9UN70 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 ABHD17AP5-201ENST00000580133 923 ntBASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC3Q9UN70 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC3Q9UN70 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC3Q9UN70 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHGC3Q9UN70 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC3Q9UN70 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.34■■□□□ 1.65
PCDHGC3Q9UN70 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC3Q9UN70 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHGC3Q9UN70 KRT18P10-201ENST00000388836 1287 ntBASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms