Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM3Q9BZL3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SMIM3Q9BZL3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.52■□□□□ 0.71
SMIM3Q9BZL3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.51■□□□□ 0.71
SMIM3Q9BZL3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM3Q9BZL3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SMIM3Q9BZL3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM3Q9BZL3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM3Q9BZL3 AL391121.1-201ENST00000607967 1349 ntBASIC19.5■□□□□ 0.71
SMIM3Q9BZL3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMIM3Q9BZL3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 AC079834.2-201ENST00000609776 1949 ntBASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 RARRES2P7-201ENST00000567349 469 ntBASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM3Q9BZL3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
SMIM3Q9BZL3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM3Q9BZL3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM3Q9BZL3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMIM3Q9BZL3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.48■□□□□ 0.71
SMIM3Q9BZL3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 LINC00273-201ENST00000539813 1452 ntBASIC19.47■□□□□ 0.71
SMIM3Q9BZL3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 AC097639.1-201ENST00000565519 1891 ntBASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM3Q9BZL3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM3Q9BZL3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM3Q9BZL3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM3Q9BZL3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM3Q9BZL3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM3Q9BZL3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 AC096887.2-201ENST00000623443 1957 ntBASIC19.43■□□□□ 0.7
SMIM3Q9BZL3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SMIM3Q9BZL3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM3Q9BZL3 CLDN5-201ENST00000403084 2357 ntBASIC19.41■□□□□ 0.7
SMIM3Q9BZL3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.41■□□□□ 0.7
SMIM3Q9BZL3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMIM3Q9BZL3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMIM3Q9BZL3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMIM3Q9BZL3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.39■□□□□ 0.69
SMIM3Q9BZL3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM3Q9BZL3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM3Q9BZL3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms