Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18■□□□□ 0.47
AP1S3Q96PC3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18■□□□□ 0.47
AP1S3Q96PC3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18■□□□□ 0.47
AP1S3Q96PC3 AP004609.3-201ENST00000610705 1884 ntBASIC18■□□□□ 0.47
AP1S3Q96PC3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP1S3Q96PC3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S3Q96PC3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S3Q96PC3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP1S3Q96PC3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S3Q96PC3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S3Q96PC3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S3Q96PC3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
AP1S3Q96PC3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
AP1S3Q96PC3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
AP1S3Q96PC3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S3Q96PC3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S3Q96PC3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S3Q96PC3 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.96■□□□□ 0.47
AP1S3Q96PC3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S3Q96PC3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
AP1S3Q96PC3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP1S3Q96PC3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S3Q96PC3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S3Q96PC3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S3Q96PC3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S3Q96PC3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S3Q96PC3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S3Q96PC3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S3Q96PC3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S3Q96PC3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.92■□□□□ 0.46
AP1S3Q96PC3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 MIR6090-201ENST00000622481 60 ntBASIC17.91■□□□□ 0.46
AP1S3Q96PC3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S3Q96PC3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 SUZ12P1-203ENST00000578195 985 ntBASIC17.9■□□□□ 0.46
AP1S3Q96PC3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 LINC00543-201ENST00000567234 1845 ntBASIC17.9■□□□□ 0.46
AP1S3Q96PC3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S3Q96PC3 AC142472.1-201ENST00000612013 1741 ntBASIC17.89■□□□□ 0.46
AP1S3Q96PC3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.89■□□□□ 0.45
AP1S3Q96PC3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S3Q96PC3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP1S3Q96PC3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.89■□□□□ 0.45
AP1S3Q96PC3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
AP1S3Q96PC3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms