Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HPS1Q92902 WHAMMP2-203ENST00000563942 1603 ntBASIC21.63■■□□□ 1.05
HPS1Q92902 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.63■■□□□ 1.05
HPS1Q92902 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.63■■□□□ 1.05
HPS1Q92902 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HPS1Q92902 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HPS1Q92902 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HPS1Q92902 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HPS1Q92902 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HPS1Q92902 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HPS1Q92902 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
HPS1Q92902 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HPS1Q92902 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.61■■□□□ 1.05
HPS1Q92902 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.61■■□□□ 1.05
HPS1Q92902 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HPS1Q92902 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HPS1Q92902 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HPS1Q92902 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.6■■□□□ 1.05
HPS1Q92902 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.6■■□□□ 1.05
HPS1Q92902 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HPS1Q92902 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.6■■□□□ 1.05
HPS1Q92902 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.6■■□□□ 1.05
HPS1Q92902 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HPS1Q92902 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HPS1Q92902 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HPS1Q92902 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HPS1Q92902 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HPS1Q92902 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HPS1Q92902 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
HPS1Q92902 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.59■■□□□ 1.05
HPS1Q92902 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HPS1Q92902 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.58■■□□□ 1.05
HPS1Q92902 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HPS1Q92902 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.58■■□□□ 1.05
HPS1Q92902 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.58■■□□□ 1.05
HPS1Q92902 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.58■■□□□ 1.04
HPS1Q92902 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
HPS1Q92902 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HPS1Q92902 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HPS1Q92902 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HPS1Q92902 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HPS1Q92902 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.57■■□□□ 1.04
HPS1Q92902 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS1Q92902 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS1Q92902 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
HPS1Q92902 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HPS1Q92902 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.56■■□□□ 1.04
HPS1Q92902 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.56■■□□□ 1.04
HPS1Q92902 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS1Q92902 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS1Q92902 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS1Q92902 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS1Q92902 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.55■■□□□ 1.04
HPS1Q92902 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HPS1Q92902 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.55■■□□□ 1.04
HPS1Q92902 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.55■■□□□ 1.04
HPS1Q92902 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HPS1Q92902 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS1Q92902 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HPS1Q92902 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HPS1Q92902 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HPS1Q92902 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
HPS1Q92902 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.54■■□□□ 1.04
HPS1Q92902 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
HPS1Q92902 AC092803.2-201ENST00000564287 1899 ntBASIC21.53■■□□□ 1.04
HPS1Q92902 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.52■■□□□ 1.04
HPS1Q92902 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS1Q92902 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS1Q92902 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS1Q92902 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.52■■□□□ 1.04
HPS1Q92902 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HPS1Q92902 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.52■■□□□ 1.04
HPS1Q92902 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.52■■□□□ 1.04
HPS1Q92902 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
HPS1Q92902 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HPS1Q92902 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
HPS1Q92902 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.51■■□□□ 1.03
HPS1Q92902 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
HPS1Q92902 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.51■■□□□ 1.03
HPS1Q92902 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.51■■□□□ 1.03
HPS1Q92902 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HPS1Q92902 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HPS1Q92902 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 429.4 ms