Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KRT78Q8N1N4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KRT78Q8N1N4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KRT78Q8N1N4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.15■■□□□ 1.3
KRT78Q8N1N4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
KRT78Q8N1N4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.14■■□□□ 1.3
KRT78Q8N1N4 RARRES2P2-201ENST00000394842 485 ntBASIC23.14■■□□□ 1.29
KRT78Q8N1N4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
KRT78Q8N1N4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KRT78Q8N1N4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.13■■□□□ 1.29
KRT78Q8N1N4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
KRT78Q8N1N4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 AC026202.3-201ENST00000600805 1127 ntBASIC23.12■■□□□ 1.29
KRT78Q8N1N4 RAP2CP1-202ENST00000605179 643 ntBASIC23.12■■□□□ 1.29
KRT78Q8N1N4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KRT78Q8N1N4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KRT78Q8N1N4 AC096887.2-201ENST00000623443 1957 ntBASIC23.1■■□□□ 1.29
KRT78Q8N1N4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
KRT78Q8N1N4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KRT78Q8N1N4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
KRT78Q8N1N4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
KRT78Q8N1N4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KRT78Q8N1N4 AC133552.2-201ENST00000619106 1032 ntBASIC23.08■■□□□ 1.29
KRT78Q8N1N4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KRT78Q8N1N4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KRT78Q8N1N4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
KRT78Q8N1N4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
KRT78Q8N1N4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.07■■□□□ 1.28
KRT78Q8N1N4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.07■■□□□ 1.28
KRT78Q8N1N4 AC009831.1-201ENST00000580420 1582 ntBASIC23.06■■□□□ 1.28
KRT78Q8N1N4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
KRT78Q8N1N4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
KRT78Q8N1N4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KRT78Q8N1N4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
KRT78Q8N1N4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
KRT78Q8N1N4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KRT78Q8N1N4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KRT78Q8N1N4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
KRT78Q8N1N4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KRT78Q8N1N4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KRT78Q8N1N4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
KRT78Q8N1N4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.03■■□□□ 1.28
KRT78Q8N1N4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
KRT78Q8N1N4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.02■■□□□ 1.28
KRT78Q8N1N4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KRT78Q8N1N4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.02■■□□□ 1.28
KRT78Q8N1N4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KRT78Q8N1N4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.01■■□□□ 1.27
KRT78Q8N1N4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KRT78Q8N1N4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
KRT78Q8N1N4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
KRT78Q8N1N4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23■■□□□ 1.27
KRT78Q8N1N4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KRT78Q8N1N4 KRT18P10-201ENST00000388836 1287 ntBASIC23■■□□□ 1.27
KRT78Q8N1N4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KRT78Q8N1N4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
KRT78Q8N1N4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KRT78Q8N1N4 AC097639.1-201ENST00000565519 1891 ntBASIC23■■□□□ 1.27
KRT78Q8N1N4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms