Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
ABCA6Q8N139 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC36.48■■■■□ 3.43
ABCA6Q8N139 RPP21-222ENST00000433076 577 ntTSL 2 BASIC36.48■■■■□ 3.43
ABCA6Q8N139 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC36.48■■■■□ 3.43
ABCA6Q8N139 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC36.47■■■■□ 3.43
ABCA6Q8N139 AL136116.3-201ENST00000402907 1138 ntBASIC36.47■■■■□ 3.43
ABCA6Q8N139 AC120024.1-201ENST00000562672 995 ntBASIC36.47■■■■□ 3.43
ABCA6Q8N139 SRR-208ENST00000576848 588 ntTSL 4 BASIC36.47■■■■□ 3.43
ABCA6Q8N139 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC36.47■■■■□ 3.43
ABCA6Q8N139 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC36.46■■■■□ 3.43
ABCA6Q8N139 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
ABCA6Q8N139 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA6Q8N139 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA6Q8N139 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA6Q8N139 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC36.45■■■■□ 3.43
ABCA6Q8N139 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC36.45■■■■□ 3.42
ABCA6Q8N139 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC36.45■■■■□ 3.42
ABCA6Q8N139 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC36.45■■■■□ 3.42
ABCA6Q8N139 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.42
ABCA6Q8N139 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC36.44■■■■□ 3.42
ABCA6Q8N139 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
ABCA6Q8N139 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC36.44■■■■□ 3.42
ABCA6Q8N139 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC36.42■■■■□ 3.42
ABCA6Q8N139 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC36.41■■■■□ 3.42
ABCA6Q8N139 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC36.41■■■■□ 3.42
ABCA6Q8N139 AC092028.1-203ENST00000608262 953 ntBASIC36.41■■■■□ 3.42
ABCA6Q8N139 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC36.41■■■■□ 3.42
ABCA6Q8N139 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC36.4■■■■□ 3.42
ABCA6Q8N139 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC36.4■■■■□ 3.42
ABCA6Q8N139 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC36.4■■■■□ 3.42
ABCA6Q8N139 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC36.4■■■■□ 3.42
ABCA6Q8N139 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC36.4■■■■□ 3.42
ABCA6Q8N139 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
ABCA6Q8N139 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
ABCA6Q8N139 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC36.38■■■■□ 3.42
ABCA6Q8N139 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC36.38■■■■□ 3.41
ABCA6Q8N139 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
ABCA6Q8N139 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
ABCA6Q8N139 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC36.37■■■■□ 3.41
ABCA6Q8N139 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC36.37■■■■□ 3.41
ABCA6Q8N139 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC36.37■■■■□ 3.41
ABCA6Q8N139 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA6Q8N139 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA6Q8N139 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC36.36■■■■□ 3.41
ABCA6Q8N139 SENP5-202ENST00000419026 973 ntTSL 3 BASIC36.36■■■■□ 3.41
ABCA6Q8N139 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC36.36■■■■□ 3.41
ABCA6Q8N139 MIR4466-201ENST00000606121 54 ntBASIC36.36■■■■□ 3.41
ABCA6Q8N139 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
ABCA6Q8N139 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC36.35■■■■□ 3.41
ABCA6Q8N139 AL512631.2-201ENST00000604634 923 ntBASIC36.35■■■■□ 3.41
ABCA6Q8N139 QDPR-206ENST00000508623 601 ntTSL 3 BASIC36.34■■■■□ 3.41
ABCA6Q8N139 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC36.34■■■■□ 3.41
ABCA6Q8N139 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC36.34■■■■□ 3.41
ABCA6Q8N139 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC36.34■■■■□ 3.41
ABCA6Q8N139 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC36.34■■■■□ 3.41
ABCA6Q8N139 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC36.33■■■■□ 3.41
ABCA6Q8N139 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC36.33■■■■□ 3.41
ABCA6Q8N139 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC36.33■■■■□ 3.41
ABCA6Q8N139 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
ABCA6Q8N139 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
ABCA6Q8N139 KRT18P10-201ENST00000388836 1287 ntBASIC36.31■■■■□ 3.4
ABCA6Q8N139 MIR3621-201ENST00000580529 85 ntBASIC36.31■■■■□ 3.4
ABCA6Q8N139 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.3■■■■□ 3.4
ABCA6Q8N139 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
ABCA6Q8N139 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
ABCA6Q8N139 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC36.29■■■■□ 3.4
ABCA6Q8N139 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC36.29■■■■□ 3.4
ABCA6Q8N139 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
ABCA6Q8N139 PROC-203ENST00000409048 1586 ntTSL 5 BASIC36.28■■■■□ 3.4
ABCA6Q8N139 AC096631.2-201ENST00000436136 790 ntBASIC36.28■■■■□ 3.4
ABCA6Q8N139 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC36.28■■■■□ 3.4
ABCA6Q8N139 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC36.27■■■■□ 3.4
ABCA6Q8N139 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC36.27■■■■□ 3.4
ABCA6Q8N139 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC36.27■■■■□ 3.4
ABCA6Q8N139 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
ABCA6Q8N139 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
ABCA6Q8N139 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
ABCA6Q8N139 MIR6724-1-201ENST00000616420 92 ntBASIC36.26■■■■□ 3.4
ABCA6Q8N139 MIR6724-2-201ENST00000616483 92 ntBASIC36.26■■■■□ 3.4
ABCA6Q8N139 MIR6724-4-201ENST00000617390 92 ntBASIC36.26■■■■□ 3.4
ABCA6Q8N139 MIR6724-3-201ENST00000622482 92 ntBASIC36.26■■■■□ 3.4
ABCA6Q8N139 RARRES2P6-201ENST00000567333 442 ntBASIC36.26■■■■□ 3.39
ABCA6Q8N139 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC36.25■■■■□ 3.39
ABCA6Q8N139 AL449106.1-201ENST00000608517 1980 ntBASIC36.25■■■■□ 3.39
ABCA6Q8N139 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC36.25■■■■□ 3.39
ABCA6Q8N139 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC36.25■■■■□ 3.39
ABCA6Q8N139 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC36.24■■■■□ 3.39
ABCA6Q8N139 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
ABCA6Q8N139 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC36.24■■■■□ 3.39
ABCA6Q8N139 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC36.24■■■■□ 3.39
ABCA6Q8N139 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC36.24■■■■□ 3.39
ABCA6Q8N139 GUK1-205ENST00000366722 850 ntTSL 3 BASIC36.23■■■■□ 3.39
ABCA6Q8N139 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA6Q8N139 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC36.23■■■■□ 3.39
ABCA6Q8N139 LSM4-201ENST00000252816 986 ntTSL 2 BASIC36.23■■■■□ 3.39
ABCA6Q8N139 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA6Q8N139 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA6Q8N139 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA6Q8N139 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA6Q8N139 MTDHP2-201ENST00000601468 714 ntBASIC36.23■■■■□ 3.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms