Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM1Q86UE6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM1Q86UE6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM1Q86UE6 MIR219A2-201ENST00000608502 1504 ntBASIC20.81■□□□□ 0.92
LRRTM1Q86UE6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM1Q86UE6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM1Q86UE6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 LINC01124-201ENST00000409786 2117 ntBASIC20.8■□□□□ 0.92
LRRTM1Q86UE6 AL359504.2-201ENST00000605506 1601 ntBASIC20.79■□□□□ 0.92
LRRTM1Q86UE6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM1Q86UE6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM1Q86UE6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM1Q86UE6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRTM1Q86UE6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM1Q86UE6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
LRRTM1Q86UE6 AP003733.4-201ENST00000623785 1697 ntBASIC20.78■□□□□ 0.92
LRRTM1Q86UE6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM1Q86UE6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
LRRTM1Q86UE6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM1Q86UE6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 AC148477.6-201ENST00000623746 465 ntBASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRTM1Q86UE6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRRTM1Q86UE6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 AC008813.1-201ENST00000536597 885 ntBASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRTM1Q86UE6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 AL359258.2-201ENST00000564063 1566 ntBASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRTM1Q86UE6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 LINC01971-201ENST00000617888 1048 ntBASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRTM1Q86UE6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRTM1Q86UE6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L13-201ENST00000554103 1267 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L15-201ENST00000611059 1267 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L23-201ENST00000615195 1269 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L24-201ENST00000617576 1269 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L22-201ENST00000618238 1269 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L20-201ENST00000619712 1269 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L21-201ENST00000622058 1269 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L10-201ENST00000622460 1267 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 DUX4L25-201ENST00000624915 1269 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 SLC6A10P-202ENST00000431994 2058 ntBASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LRRTM1Q86UE6 AC097639.1-201ENST00000565519 1891 ntBASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRTM1Q86UE6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRRTM1Q86UE6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRTM1Q86UE6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRTM1Q86UE6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRTM1Q86UE6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRTM1Q86UE6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms