Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
DDX53Q86TM3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX53Q86TM3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX53Q86TM3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX53Q86TM3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX53Q86TM3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
DDX53Q86TM3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
DDX53Q86TM3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX53Q86TM3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX53Q86TM3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX53Q86TM3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX53Q86TM3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX53Q86TM3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.76■■□□□ 1.71
DDX53Q86TM3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.76■■□□□ 1.71
DDX53Q86TM3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX53Q86TM3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX53Q86TM3 AC142472.1-201ENST00000612013 1741 ntBASIC25.75■■□□□ 1.71
DDX53Q86TM3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX53Q86TM3 KRT18P24-201ENST00000344739 1156 ntBASIC25.75■■□□□ 1.71
DDX53Q86TM3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
DDX53Q86TM3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.74■■□□□ 1.71
DDX53Q86TM3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
DDX53Q86TM3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
DDX53Q86TM3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX53Q86TM3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
DDX53Q86TM3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
DDX53Q86TM3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
DDX53Q86TM3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.73■■□□□ 1.71
DDX53Q86TM3 KRT125P-201ENST00000546827 989 ntBASIC25.73■■□□□ 1.71
DDX53Q86TM3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.72■■□□□ 1.71
DDX53Q86TM3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
DDX53Q86TM3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX53Q86TM3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
DDX53Q86TM3 BX664725.1-201ENST00000438252 379 ntBASIC25.72■■□□□ 1.71
DDX53Q86TM3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
DDX53Q86TM3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
DDX53Q86TM3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
DDX53Q86TM3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
DDX53Q86TM3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX53Q86TM3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.71■■□□□ 1.71
DDX53Q86TM3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
DDX53Q86TM3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.7■■□□□ 1.71
DDX53Q86TM3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX53Q86TM3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX53Q86TM3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
DDX53Q86TM3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
DDX53Q86TM3 MIR4787-201ENST00000607364 84 ntBASIC25.7■■□□□ 1.7
DDX53Q86TM3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.7■■□□□ 1.7
DDX53Q86TM3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
DDX53Q86TM3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX53Q86TM3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX53Q86TM3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX53Q86TM3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX53Q86TM3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX53Q86TM3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
DDX53Q86TM3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
DDX53Q86TM3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.68■■□□□ 1.7
DDX53Q86TM3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
DDX53Q86TM3 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.68■■□□□ 1.7
DDX53Q86TM3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
DDX53Q86TM3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX53Q86TM3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX53Q86TM3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
DDX53Q86TM3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
DDX53Q86TM3 AC019069.1-201ENST00000610008 1333 ntBASIC25.67■■□□□ 1.7
DDX53Q86TM3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX53Q86TM3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX53Q86TM3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.67■■□□□ 1.7
DDX53Q86TM3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX53Q86TM3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.66■■□□□ 1.7
DDX53Q86TM3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.66■■□□□ 1.7
DDX53Q86TM3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DDX53Q86TM3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX53Q86TM3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX53Q86TM3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX53Q86TM3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.65■■□□□ 1.7
DDX53Q86TM3 AC137630.3-201ENST00000607245 391 ntBASIC25.65■■□□□ 1.7
DDX53Q86TM3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
DDX53Q86TM3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX53Q86TM3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
DDX53Q86TM3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX53Q86TM3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX53Q86TM3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.64■■□□□ 1.69
DDX53Q86TM3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX53Q86TM3 AC120024.1-201ENST00000562672 995 ntBASIC25.63■■□□□ 1.69
DDX53Q86TM3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.63■■□□□ 1.69
DDX53Q86TM3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.63■■□□□ 1.69
DDX53Q86TM3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX53Q86TM3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.62■■□□□ 1.69
DDX53Q86TM3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX53Q86TM3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX53Q86TM3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.62■■□□□ 1.69
DDX53Q86TM3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX53Q86TM3 UNC93B8-201ENST00000511903 705 ntBASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms