Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VCPP55072 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.72■■□□□ 1.71
VCPP55072 AC139795.1-202ENST00000500444 432 ntBASIC25.72■■□□□ 1.71
VCPP55072 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.72■■□□□ 1.71
VCPP55072 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.72■■□□□ 1.71
VCPP55072 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.71■■□□□ 1.71
VCPP55072 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.71■■□□□ 1.71
VCPP55072 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
VCPP55072 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VCPP55072 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
VCPP55072 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
VCPP55072 AC091060.1-201ENST00000623524 1766 ntBASIC25.7■■□□□ 1.7
VCPP55072 AL449106.1-201ENST00000608517 1980 ntBASIC25.7■■□□□ 1.7
VCPP55072 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.7■■□□□ 1.7
VCPP55072 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VCPP55072 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.7■■□□□ 1.7
VCPP55072 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
VCPP55072 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
VCPP55072 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VCPP55072 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VCPP55072 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VCPP55072 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VCPP55072 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.68■■□□□ 1.7
VCPP55072 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.68■■□□□ 1.7
VCPP55072 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VCPP55072 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VCPP55072 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VCPP55072 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.67■■□□□ 1.7
VCPP55072 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VCPP55072 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
VCPP55072 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VCPP55072 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.66■■□□□ 1.7
VCPP55072 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VCPP55072 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VCPP55072 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VCPP55072 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VCPP55072 AC008406.3-201ENST00000620001 1374 ntBASIC25.65■■□□□ 1.7
VCPP55072 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.65■■□□□ 1.7
VCPP55072 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.64■■□□□ 1.7
VCPP55072 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.64■■□□□ 1.7
VCPP55072 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
VCPP55072 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
VCPP55072 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VCPP55072 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
VCPP55072 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.63■■□□□ 1.69
VCPP55072 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
VCPP55072 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.63■■□□□ 1.69
VCPP55072 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.63■■□□□ 1.69
VCPP55072 AP004609.3-201ENST00000610705 1884 ntBASIC25.63■■□□□ 1.69
VCPP55072 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VCPP55072 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.62■■□□□ 1.69
VCPP55072 MIR6765-201ENST00000614092 87 ntBASIC25.62■■□□□ 1.69
VCPP55072 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VCPP55072 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
VCPP55072 MIR4508-201ENST00000584178 70 ntBASIC25.61■■□□□ 1.69
VCPP55072 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.6■■□□□ 1.69
VCPP55072 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
VCPP55072 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
VCPP55072 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VCPP55072 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.6■■□□□ 1.69
VCPP55072 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
VCPP55072 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.59■■□□□ 1.69
VCPP55072 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
VCPP55072 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VCPP55072 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
VCPP55072 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
VCPP55072 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
VCPP55072 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
VCPP55072 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.58■■□□□ 1.69
VCPP55072 AC103724.3-201ENST00000564481 992 ntBASIC25.58■■□□□ 1.69
VCPP55072 AC093536.1-201ENST00000569153 554 ntBASIC25.58■■□□□ 1.69
VCPP55072 RAP2CP1-202ENST00000605179 643 ntBASIC25.58■■□□□ 1.69
VCPP55072 AL031848.2-201ENST00000607670 837 ntBASIC25.58■■□□□ 1.69
VCPP55072 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
VCPP55072 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
VCPP55072 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VCPP55072 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
VCPP55072 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.58■■□□□ 1.68
VCPP55072 WHAMMP3-201ENST00000611636 1609 ntBASIC25.57■■□□□ 1.68
VCPP55072 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.57■■□□□ 1.68
VCPP55072 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
VCPP55072 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.57■■□□□ 1.68
VCPP55072 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
VCPP55072 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VCPP55072 AC145676.1-201ENST00000514988 2004 ntBASIC25.56■■□□□ 1.68
VCPP55072 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VCPP55072 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.56■■□□□ 1.68
VCPP55072 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VCPP55072 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
VCPP55072 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.56■■□□□ 1.68
VCPP55072 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VCPP55072 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.55■■□□□ 1.68
VCPP55072 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.55■■□□□ 1.68
VCPP55072 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.55■■□□□ 1.68
VCPP55072 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.55■■□□□ 1.68
VCPP55072 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
VCPP55072 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
VCPP55072 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
VCPP55072 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
VCPP55072 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms