Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC34P49427 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.85■□□□□ 0.61
CDC34P49427 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC34P49427 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC34P49427 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC34P49427 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.85■□□□□ 0.61
CDC34P49427 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC34P49427 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC34P49427 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.84■□□□□ 0.61
CDC34P49427 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC34P49427 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDC34P49427 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDC34P49427 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC34P49427 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC34P49427 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.83■□□□□ 0.61
CDC34P49427 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC34P49427 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDC34P49427 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.83■□□□□ 0.6
CDC34P49427 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDC34P49427 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDC34P49427 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.83■□□□□ 0.6
CDC34P49427 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC34P49427 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDC34P49427 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC34P49427 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 AP003733.4-201ENST00000623785 1697 ntBASIC18.82■□□□□ 0.6
CDC34P49427 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC34P49427 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDC34P49427 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CDC34P49427 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC34P49427 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC34P49427 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC34P49427 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 AC097639.1-201ENST00000565519 1891 ntBASIC18.81■□□□□ 0.6
CDC34P49427 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 AC068473.5-201ENST00000616428 2072 ntBASIC18.81■□□□□ 0.6
CDC34P49427 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CDC34P49427 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDC34P49427 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC34P49427 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDC34P49427 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC34P49427 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC34P49427 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC34P49427 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC34P49427 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC34P49427 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC34P49427 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC34P49427 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC34P49427 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC34P49427 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CDC34P49427 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC34P49427 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC34P49427 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC34P49427 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.78■□□□□ 0.6
CDC34P49427 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC34P49427 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDC34P49427 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC34P49427 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC34P49427 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC34P49427 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDC34P49427 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC34P49427 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC34P49427 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC34P49427 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC34P49427 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC34P49427 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC34P49427 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDC34P49427 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC34P49427 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC34P49427 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms