Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC6A12P48065 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
SLC6A12P48065 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.31■■□□□ 1.32
SLC6A12P48065 RNF126P1-201ENST00000567452 1320 ntBASIC23.31■■□□□ 1.32
SLC6A12P48065 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SLC6A12P48065 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLC6A12P48065 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.3■■□□□ 1.32
SLC6A12P48065 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.3■■□□□ 1.32
SLC6A12P48065 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A12P48065 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A12P48065 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLC6A12P48065 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SLC6A12P48065 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC6A12P48065 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SLC6A12P48065 RAP2CP1-202ENST00000605179 643 ntBASIC23.28■■□□□ 1.32
SLC6A12P48065 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC6A12P48065 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A12P48065 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.27■■□□□ 1.32
SLC6A12P48065 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SLC6A12P48065 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A12P48065 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC6A12P48065 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.27■■□□□ 1.32
SLC6A12P48065 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.31
SLC6A12P48065 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A12P48065 AC026202.3-201ENST00000600805 1127 ntBASIC23.26■■□□□ 1.31
SLC6A12P48065 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A12P48065 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC6A12P48065 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC6A12P48065 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLC6A12P48065 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SLC6A12P48065 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC6A12P48065 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SLC6A12P48065 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC6A12P48065 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 AC097639.1-201ENST00000565519 1891 ntBASIC23.23■■□□□ 1.31
SLC6A12P48065 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC6A12P48065 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC6A12P48065 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.22■■□□□ 1.31
SLC6A12P48065 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SLC6A12P48065 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.22■■□□□ 1.31
SLC6A12P48065 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SLC6A12P48065 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC6A12P48065 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.21■■□□□ 1.31
SLC6A12P48065 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC6A12P48065 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC6A12P48065 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.2■■□□□ 1.3
SLC6A12P48065 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SLC6A12P48065 HSD17B1P1-201ENST00000590052 955 ntBASIC23.2■■□□□ 1.3
SLC6A12P48065 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC6A12P48065 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.19■■□□□ 1.3
SLC6A12P48065 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A12P48065 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A12P48065 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.19■■□□□ 1.3
SLC6A12P48065 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC6A12P48065 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.19■■□□□ 1.3
SLC6A12P48065 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
SLC6A12P48065 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
SLC6A12P48065 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
SLC6A12P48065 AC009831.1-201ENST00000580420 1582 ntBASIC23.18■■□□□ 1.3
SLC6A12P48065 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC6A12P48065 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SLC6A12P48065 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC6A12P48065 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC6A12P48065 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC6A12P48065 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC6A12P48065 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
SLC6A12P48065 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms