Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.33■□□□□ 0.85
CD3DP04234 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CD3DP04234 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.33■□□□□ 0.85
CD3DP04234 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD3DP04234 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD3DP04234 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD3DP04234 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD3DP04234 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD3DP04234 AC068473.5-201ENST00000616428 2072 ntBASIC20.33■□□□□ 0.84
CD3DP04234 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD3DP04234 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD3DP04234 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CD3DP04234 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.32■□□□□ 0.84
CD3DP04234 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD3DP04234 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD3DP04234 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CD3DP04234 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD3DP04234 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD3DP04234 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.31■□□□□ 0.84
CD3DP04234 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.31■□□□□ 0.84
CD3DP04234 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD3DP04234 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CD3DP04234 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD3DP04234 AC097639.1-201ENST00000565519 1891 ntBASIC20.3■□□□□ 0.84
CD3DP04234 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CD3DP04234 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD3DP04234 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD3DP04234 AP003733.4-201ENST00000623785 1697 ntBASIC20.3■□□□□ 0.84
CD3DP04234 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD3DP04234 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD3DP04234 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD3DP04234 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD3DP04234 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CD3DP04234 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD3DP04234 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.29■□□□□ 0.84
CD3DP04234 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CD3DP04234 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD3DP04234 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD3DP04234 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD3DP04234 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD3DP04234 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD3DP04234 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CD3DP04234 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD3DP04234 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.28■□□□□ 0.84
CD3DP04234 DUX4L28-201ENST00000623687 678 ntBASIC20.28■□□□□ 0.84
CD3DP04234 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
CD3DP04234 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.27■□□□□ 0.84
CD3DP04234 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.27■□□□□ 0.84
CD3DP04234 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD3DP04234 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD3DP04234 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CD3DP04234 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD3DP04234 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD3DP04234 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CD3DP04234 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.27■□□□□ 0.84
CD3DP04234 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD3DP04234 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD3DP04234 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD3DP04234 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.26■□□□□ 0.83
CD3DP04234 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.26■□□□□ 0.83
CD3DP04234 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
CD3DP04234 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD3DP04234 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CD3DP04234 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.25■□□□□ 0.83
CD3DP04234 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CD3DP04234 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD3DP04234 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.24■□□□□ 0.83
CD3DP04234 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CD3DP04234 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD3DP04234 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CD3DP04234 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.23■□□□□ 0.83
CD3DP04234 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CD3DP04234 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.23■□□□□ 0.83
CD3DP04234 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.23■□□□□ 0.83
CD3DP04234 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD3DP04234 LINC00543-201ENST00000567234 1845 ntBASIC20.23■□□□□ 0.83
CD3DP04234 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.22■□□□□ 0.83
CD3DP04234 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD3DP04234 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CD3DP04234 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD3DP04234 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.22■□□□□ 0.83
CD3DP04234 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.22■□□□□ 0.83
CD3DP04234 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD3DP04234 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD3DP04234 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CD3DP04234 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.21■□□□□ 0.83
CD3DP04234 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD3DP04234 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms