Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN4O14493 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN4O14493 DUX4L9-201ENST00000449051 1259 ntBASIC22.63■■□□□ 1.21
CLDN4O14493 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN4O14493 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CLDN4O14493 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.63■■□□□ 1.21
CLDN4O14493 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN4O14493 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
CLDN4O14493 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN4O14493 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN4O14493 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.62■■□□□ 1.21
CLDN4O14493 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CLDN4O14493 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN4O14493 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN4O14493 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN4O14493 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN4O14493 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.61■■□□□ 1.21
CLDN4O14493 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN4O14493 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CLDN4O14493 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CLDN4O14493 TSPY13P-201ENST00000338964 914 ntBASIC22.6■■□□□ 1.21
CLDN4O14493 ATP5G2P3-201ENST00000429083 425 ntBASIC22.6■■□□□ 1.21
CLDN4O14493 SPCS2P3-201ENST00000500401 656 ntBASIC22.6■■□□□ 1.21
CLDN4O14493 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CLDN4O14493 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN4O14493 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.6■■□□□ 1.21
CLDN4O14493 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN4O14493 AC004987.1-201ENST00000428627 508 ntBASIC22.59■■□□□ 1.21
CLDN4O14493 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.59■■□□□ 1.21
CLDN4O14493 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN4O14493 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN4O14493 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN4O14493 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN4O14493 AC010501.1-201ENST00000606270 1962 ntBASIC22.58■■□□□ 1.21
CLDN4O14493 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.58■■□□□ 1.21
CLDN4O14493 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.58■■□□□ 1.21
CLDN4O14493 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.58■■□□□ 1.21
CLDN4O14493 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.58■■□□□ 1.2
CLDN4O14493 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLDN4O14493 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN4O14493 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN4O14493 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN4O14493 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.57■■□□□ 1.2
CLDN4O14493 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN4O14493 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 AC091060.1-201ENST00000623524 1766 ntBASIC22.57■■□□□ 1.2
CLDN4O14493 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 ERN1-208ENST00000606895 2068 ntBASIC22.57■■□□□ 1.2
CLDN4O14493 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN4O14493 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.57■■□□□ 1.2
CLDN4O14493 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CLDN4O14493 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN4O14493 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN4O14493 DUX4L18-201ENST00000553347 1267 ntBASIC22.56■■□□□ 1.2
CLDN4O14493 AC145676.1-201ENST00000514988 2004 ntBASIC22.56■■□□□ 1.2
CLDN4O14493 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN4O14493 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN4O14493 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN4O14493 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN4O14493 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN4O14493 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN4O14493 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
CLDN4O14493 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.55■■□□□ 1.2
CLDN4O14493 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLDN4O14493 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN4O14493 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.54■■□□□ 1.2
CLDN4O14493 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.54■■□□□ 1.2
CLDN4O14493 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLDN4O14493 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN4O14493 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CLDN4O14493 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.53■■□□□ 1.2
CLDN4O14493 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN4O14493 AL033527.3-201ENST00000566366 1196 ntBASIC22.53■■□□□ 1.2
CLDN4O14493 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
CLDN4O14493 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN4O14493 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN4O14493 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLDN4O14493 DUSP8P4-201ENST00000399538 1761 ntBASIC22.53■■□□□ 1.2
CLDN4O14493 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN4O14493 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.52■■□□□ 1.2
CLDN4O14493 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CLDN4O14493 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CLDN4O14493 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN4O14493 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN4O14493 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLDN4O14493 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN4O14493 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN4O14493 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.51■■□□□ 1.19
CLDN4O14493 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN4O14493 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLDN4O14493 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.51■■□□□ 1.19
CLDN4O14493 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLDN4O14493 RPS2P7-201ENST00000447334 885 ntBASIC22.5■■□□□ 1.19
CLDN4O14493 AC139795.1-202ENST00000500444 432 ntBASIC22.5■■□□□ 1.19
CLDN4O14493 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms