Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.237e-7■□□□□ 8.6
LARP4Q71RC2 TMEM205-213ENST00000590788 393 ntTSL 311.06□□□□□ -0.647e-7■□□□□ 8.6
LARP4Q71RC2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.014e-7■□□□□ 8.6
LARP4Q71RC2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.48■□□□□ 0.237e-19■□□□□ 8.6
LARP4Q71RC2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.826e-7■□□□□ 8.6
LARP4Q71RC2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.186e-7■□□□□ 8.6
LARP4Q71RC2 RPS2-211ENST00000531065 1548 ntTSL 525.06■■□□□ 1.62e-8■□□□□ 8.6
LARP4Q71RC2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.69■■□□□ 1.382e-8■□□□□ 8.6
LARP4Q71RC2 RPS2-206ENST00000527302 719 ntTSL 323.63■■□□□ 1.372e-8■□□□□ 8.6
LARP4Q71RC2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.19■■□□□ 1.32e-8■□□□□ 8.6
LARP4Q71RC2 RPS2-205ENST00000527109 1030 ntTSL 1 (best)23.19■■□□□ 1.32e-8■□□□□ 8.6
LARP4Q71RC2 RPS2-207ENST00000527826 837 ntTSL 1 (best)23.19■■□□□ 1.32e-8■□□□□ 8.6
LARP4Q71RC2 RPS2-208ENST00000527871 1243 ntTSL 1 (best)22.04■■□□□ 1.122e-8■□□□□ 8.6
LARP4Q71RC2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.034e-7■□□□□ 8.6
LARP4Q71RC2 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.374e-7■□□□□ 8.6
LARP4Q71RC2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.63■□□□□ 0.576e-26■□□□□ 8.6
LARP4Q71RC2 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.87□□□□□ -1.316e-26■□□□□ 8.6
LARP4Q71RC2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.386e-26■□□□□ 8.6
LARP4Q71RC2 RPL7-205ENST00000431653 563 ntTSL 35.6□□□□□ -1.516e-26■□□□□ 8.6
LARP4Q71RC2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.59□□□□□ -1.516e-26■□□□□ 8.6
LARP4Q71RC2 RPL7-206ENST00000435330 445 ntTSL 34.28□□□□□ -1.726e-26■□□□□ 8.6
LARP4Q71RC2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.781e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.21■□□□□ 0.671e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-205ENST00000558217 882 ntTSL 211.97□□□□□ -0.491e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-206ENST00000558924 3626 ntTSL 1 (best)11.9□□□□□ -0.51e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-207ENST00000559376 2204 nt10.5□□□□□ -0.731e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC9.56□□□□□ -0.881e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-210ENST00000560409 819 ntTSL 37.26□□□□□ -1.251e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.09□□□□□ -1.271e-7■□□□□ 8.6
LARP4Q71RC2 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.09□□□□□ -1.271e-7■□□□□ 8.6
LARP4Q71RC2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.161e-7■□□□□ 8.6
LARP4Q71RC2 PTGES2-212ENST00000496594 2103 ntTSL 522.26■■□□□ 1.151e-7■□□□□ 8.6
LARP4Q71RC2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.891e-7■□□□□ 8.6
LARP4Q71RC2 PTGES2-211ENST00000493205 1514 ntTSL 518.86■□□□□ 0.611e-7■□□□□ 8.6
LARP4Q71RC2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.581e-7■□□□□ 8.6
LARP4Q71RC2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.12■□□□□ 0.331e-7■□□□□ 8.6
LARP4Q71RC2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.06■□□□□ 0.321e-7■□□□□ 8.6
LARP4Q71RC2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.191e-7■□□□□ 8.6
LARP4Q71RC2 MPZ-201ENST00000463290 1693 ntTSL 1 (best)15.09■□□□□ 0.011e-7■□□□□ 8.6
LARP4Q71RC2 PTGES2-205ENST00000476655 1063 ntTSL 314.9□□□□□ -0.021e-7■□□□□ 8.6
LARP4Q71RC2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.091e-7■□□□□ 8.6
LARP4Q71RC2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.31□□□□□ -0.121e-7■□□□□ 8.6
LARP4Q71RC2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.171e-7■□□□□ 8.6
LARP4Q71RC2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.591e-7■□□□□ 8.6
LARP4Q71RC2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.2■□□□□ 0.343e-6■□□□□ 8.6
LARP4Q71RC2 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.47□□□□□ -0.413e-6■□□□□ 8.6
LARP4Q71RC2 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.613e-6■□□□□ 8.6
LARP4Q71RC2 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC10.18□□□□□ -0.783e-6■□□□□ 8.6
LARP4Q71RC2 HADHB-207ENST00000494615 2883 ntTSL 27.65□□□□□ -1.183e-6■□□□□ 8.6
LARP4Q71RC2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.39■□□□□ 0.544e-28■□□□□ 8.6
LARP4Q71RC2 P4HB-210ENST00000476482 765 ntTSL 1 (best)11.93□□□□□ -0.54e-28■□□□□ 8.6
LARP4Q71RC2 P4HB-215ENST00000571507 493 ntTSL 24.99□□□□□ -1.614e-28■□□□□ 8.6
LARP4Q71RC2 SEC61B-202ENST00000481573 687 ntTSL 212.5□□□□□ -0.411e-8■□□□□ 8.6
LARP4Q71RC2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.29■□□□□ 0.688e-13■□□□□ 8.6
LARP4Q71RC2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.668e-13■□□□□ 8.6
LARP4Q71RC2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.148e-13■□□□□ 8.6
LARP4Q71RC2 CTDSP2-202ENST00000547169 1340 ntTSL 214.58□□□□□ -0.088e-13■□□□□ 8.6
LARP4Q71RC2 CTDSP2-205ENST00000549039 797 ntTSL 211.01□□□□□ -0.658e-13■□□□□ 8.6
LARP4Q71RC2 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.972e-24■□□□□ 8.6
LARP4Q71RC2 CFI-207ENST00000618244 1345 ntTSL 5 BASIC7.5□□□□□ -1.218e-13■□□□□ 8.6
LARP4Q71RC2 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.268e-13■□□□□ 8.6
LARP4Q71RC2 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.328e-13■□□□□ 8.6
LARP4Q71RC2 CFI-203ENST00000504853 2368 ntTSL 26.28□□□□□ -1.48e-13■□□□□ 8.6
LARP4Q71RC2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.578e-13■□□□□ 8.6
LARP4Q71RC2 FASN-210ENST00000636968 100 ntTSL 515.31■□□□□ 0.043e-10■□□□□ 8.6
LARP4Q71RC2 FASN-207ENST00000635197 627 ntTSL 314.5□□□□□ -0.093e-10■□□□□ 8.6
LARP4Q71RC2 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.353e-10■□□□□ 8.6
LARP4Q71RC2 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.373e-10■□□□□ 8.6
LARP4Q71RC2 FASN-213ENST00000637693 100 ntTSL 59.05□□□□□ -0.963e-10■□□□□ 8.6
LARP4Q71RC2 FASN-211ENST00000637026 100 ntTSL 58.91□□□□□ -0.983e-10■□□□□ 8.6
LARP4Q71RC2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.272e-11■□□□□ 8.6
LARP4Q71RC2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.065e-6■□□□□ 8.6
LARP4Q71RC2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.12■□□□□ 0.975e-6■□□□□ 8.6
LARP4Q71RC2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.571e-6■□□□□ 8.6
LARP4Q71RC2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.84■□□□□ 0.291e-6■□□□□ 8.6
LARP4Q71RC2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.37□□□□□ -0.271e-6■□□□□ 8.6
LARP4Q71RC2 NAXE-205ENST00000488840 529 ntTSL 27.76□□□□□ -1.175e-6■□□□□ 8.6
LARP4Q71RC2 HNRNPA1-212ENST00000551679 359 ntTSL 25.8□□□□□ -1.487e-20■□□□□ 8.5
LARP4Q71RC2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.823e-10■□□□□ 8.5
LARP4Q71RC2 PXDC1-203ENST00000477592 1697 ntTSL 516.85■□□□□ 0.293e-10■□□□□ 8.5
LARP4Q71RC2 PXDC1-201ENST00000380277 1538 ntTSL 314.34□□□□□ -0.113e-10■□□□□ 8.5
LARP4Q71RC2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.495e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-210ENST00000627604 565 ntTSL 420.51■□□□□ 0.875e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.53■□□□□ 0.565e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.06■□□□□ 0.485e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.77■□□□□ 0.445e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.77■□□□□ 0.125e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.17■□□□□ 0.025e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-204ENST00000465887 2118 ntTSL 215.16■□□□□ 0.025e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC10.41□□□□□ -0.745e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.385e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.41□□□□□ -1.385e-9■□□□□ 8.5
LARP4Q71RC2 POLR1D-222ENST00000637389 129 ntTSL 51.34□□□□□ -2.195e-9■□□□□ 8.5
LARP4Q71RC2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.022e-29■□□□□ 8.5
LARP4Q71RC2 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC10.84□□□□□ -0.672e-29■□□□□ 8.5
LARP4Q71RC2 SLC13A5-209ENST00000574580 5398 nt8.93□□□□□ -0.982e-29■□□□□ 8.5
LARP4Q71RC2 SULT1A1-208ENST00000566189 939 ntTSL 511.18□□□□□ -0.622e-7■□□□□ 8.5
LARP4Q71RC2 OSTC-202ENST00000505745 628 ntTSL 59.2□□□□□ -0.942e-7■□□□□ 8.5
LARP4Q71RC2 OSTC-203ENST00000510556 331 ntTSL 56.87□□□□□ -1.312e-7■□□□□ 8.5
LARP4Q71RC2 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.48□□□□□ -1.372e-7■□□□□ 8.5
Retrieved 100 of 15,922 protein–RNA pairs in 325.4 ms