RNA–Protein interactions for RNA: ENST00000560409.5

SEC11A-210, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-210ENST00000560409 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
SEC11A-210ENST00000560409 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
SEC11A-210ENST00000560409 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
SEC11A-210ENST00000560409 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
SEC11A-210ENST00000560409 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
SEC11A-210ENST00000560409 FOXD1Q16676 465 aa21.23■□□□□ 0.99
SEC11A-210ENST00000560409 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
SEC11A-210ENST00000560409 ADRA2BP18089 450 aa20.58■□□□□ 0.89
SEC11A-210ENST00000560409 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
SEC11A-210ENST00000560409 MSH5O43196 834 aa19.51■□□□□ 0.71
SEC11A-210ENST00000560409 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
SEC11A-210ENST00000560409 KCNA4P22459 653 aa18.99■□□□□ 0.63
SEC11A-210ENST00000560409 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
SEC11A-210ENST00000560409 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.6
SEC11A-210ENST00000560409 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
SEC11A-210ENST00000560409 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
SEC11A-210ENST00000560409 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
SEC11A-210ENST00000560409 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
SEC11A-210ENST00000560409 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
SEC11A-210ENST00000560409 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
SEC11A-210ENST00000560409 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
SEC11A-210ENST00000560409 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
SEC11A-210ENST00000560409 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
SEC11A-210ENST00000560409 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
SEC11A-210ENST00000560409 ZBTB22O15209 634 aa17.48■□□□□ 0.39
SEC11A-210ENST00000560409 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
SEC11A-210ENST00000560409 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
SEC11A-210ENST00000560409 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
SEC11A-210ENST00000560409 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
SEC11A-210ENST00000560409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEC11A-210ENST00000560409 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
SEC11A-210ENST00000560409 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
SEC11A-210ENST00000560409 ATXN8OSP0DMR3 200 aa16.86■□□□□ 0.29
SEC11A-210ENST00000560409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
SEC11A-210ENST00000560409 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
SEC11A-210ENST00000560409 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
SEC11A-210ENST00000560409 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
SEC11A-210ENST00000560409 APLP2Q06481 763 aa16.61■□□□□ 0.25
SEC11A-210ENST00000560409 C1QBPQ07021 282 aaKnown RBP16.57■□□□□ 0.24
SEC11A-210ENST00000560409 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
SEC11A-210ENST00000560409 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
SEC11A-210ENST00000560409 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
SEC11A-210ENST00000560409 CAPN15O75808 1086 aa16.27■□□□□ 0.2
SEC11A-210ENST00000560409 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
SEC11A-210ENST00000560409 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
SEC11A-210ENST00000560409 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
SEC11A-210ENST00000560409 POLA2Q14181 598 aa16.08■□□□□ 0.16
SEC11A-210ENST00000560409 DSG3P32926 999 aa16■□□□□ 0.15
SEC11A-210ENST00000560409 ABCB7O75027 752 aa15.98■□□□□ 0.15
SEC11A-210ENST00000560409 FBLN2P98095 1184 aa15.88■□□□□ 0.13
SEC11A-210ENST00000560409 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
SEC11A-210ENST00000560409 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
SEC11A-210ENST00000560409 FKBP8Q14318 412 aa15.85■□□□□ 0.13
SEC11A-210ENST00000560409 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
SEC11A-210ENST00000560409 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
SEC11A-210ENST00000560409 PROM2Q8N271 834 aa15.48■□□□□ 0.07
SEC11A-210ENST00000560409 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
SEC11A-210ENST00000560409 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
SEC11A-210ENST00000560409 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
SEC11A-210ENST00000560409 ZNF692Q9BU19 519 aaPredicted RBP15.4■□□□□ 0.06
SEC11A-210ENST00000560409 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
SEC11A-210ENST00000560409 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
SEC11A-210ENST00000560409 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
SEC11A-210ENST00000560409 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEC11A-210ENST00000560409 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
SEC11A-210ENST00000560409 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
SEC11A-210ENST00000560409 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
SEC11A-210ENST00000560409 REM2Q8IYK8 340 aaPredicted RBP14.95□□□□□ -0.02
SEC11A-210ENST00000560409 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
SEC11A-210ENST00000560409 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
SEC11A-210ENST00000560409 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
SEC11A-210ENST00000560409 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
SEC11A-210ENST00000560409 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
SEC11A-210ENST00000560409 MIER1Q8N108 512 aa14.78□□□□□ -0.04
SEC11A-210ENST00000560409 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
SEC11A-210ENST00000560409 PITPNM1O00562 1244 aa14.77□□□□□ -0.05
SEC11A-210ENST00000560409 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
SEC11A-210ENST00000560409 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
SEC11A-210ENST00000560409 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
SEC11A-210ENST00000560409 ZBTB47Q9UFB7 747 aaPredicted RBP14.66□□□□□ -0.06
SEC11A-210ENST00000560409 SPOCK2Q92563 424 aa14.64□□□□□ -0.07
SEC11A-210ENST00000560409 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
SEC11A-210ENST00000560409 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
SEC11A-210ENST00000560409 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
SEC11A-210ENST00000560409 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
SEC11A-210ENST00000560409 PKD2Q13563 968 aa14.45□□□□□ -0.1
SEC11A-210ENST00000560409 NUBP1P53384 320 aa14.41□□□□□ -0.1
SEC11A-210ENST00000560409 CHADLQ6NUI6 762 aa14.41□□□□□ -0.1
SEC11A-210ENST00000560409 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
SEC11A-210ENST00000560409 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
SEC11A-210ENST00000560409 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
SEC11A-210ENST00000560409 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
SEC11A-210ENST00000560409 GSE1Q14687 1217 aa14.32□□□□□ -0.12
SEC11A-210ENST00000560409 CIZ1Q9ULV3 898 aaPredicted RBP14.32□□□□□ -0.12
SEC11A-210ENST00000560409 ECM2O94769 699 aaPredicted RBP14.29□□□□□ -0.12
SEC11A-210ENST00000560409 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
SEC11A-210ENST00000560409 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
SEC11A-210ENST00000560409 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
SEC11A-210ENST00000560409 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
SEC11A-210ENST00000560409 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms