RNA–Protein interactions for RNA: ENST00000551679.1

HNRNPA1-212, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 2

Gene HNRNPA1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-212ENST00000551679 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
HNRNPA1-212ENST00000551679 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
HNRNPA1-212ENST00000551679 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
HNRNPA1-212ENST00000551679 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
HNRNPA1-212ENST00000551679 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
HNRNPA1-212ENST00000551679 FOXD1Q16676 465 aa17.19■□□□□ 0.34
HNRNPA1-212ENST00000551679 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
HNRNPA1-212ENST00000551679 ADRA2BP18089 450 aa16.64■□□□□ 0.25
HNRNPA1-212ENST00000551679 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
HNRNPA1-212ENST00000551679 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
HNRNPA1-212ENST00000551679 MSH5O43196 834 aa15.76■□□□□ 0.11
HNRNPA1-212ENST00000551679 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
HNRNPA1-212ENST00000551679 KCNA4P22459 653 aa15.26■□□□□ 0.03
HNRNPA1-212ENST00000551679 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
HNRNPA1-212ENST00000551679 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
HNRNPA1-212ENST00000551679 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
HNRNPA1-212ENST00000551679 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
HNRNPA1-212ENST00000551679 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
HNRNPA1-212ENST00000551679 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
HNRNPA1-212ENST00000551679 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
HNRNPA1-212ENST00000551679 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
HNRNPA1-212ENST00000551679 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
HNRNPA1-212ENST00000551679 DNAJC5BQ9UF47 199 aa14.4□□□□□ -0.1
HNRNPA1-212ENST00000551679 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
HNRNPA1-212ENST00000551679 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
HNRNPA1-212ENST00000551679 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
HNRNPA1-212ENST00000551679 ZBTB22O15209 634 aa14.07□□□□□ -0.16
HNRNPA1-212ENST00000551679 SLC4A2P04920 1241 aa14.02□□□□□ -0.17
HNRNPA1-212ENST00000551679 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
HNRNPA1-212ENST00000551679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.191e-23■□□□□ 8.2
HNRNPA1-212ENST00000551679 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
HNRNPA1-212ENST00000551679 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
HNRNPA1-212ENST00000551679 NISCHQ9Y2I1 1504 aa13.61□□□□□ -0.23
HNRNPA1-212ENST00000551679 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
HNRNPA1-212ENST00000551679 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
HNRNPA1-212ENST00000551679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
HNRNPA1-212ENST00000551679 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
HNRNPA1-212ENST00000551679 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
HNRNPA1-212ENST00000551679 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
HNRNPA1-212ENST00000551679 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
HNRNPA1-212ENST00000551679 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
HNRNPA1-212ENST00000551679 APLP2Q06481 763 aa13.31□□□□□ -0.28
HNRNPA1-212ENST00000551679 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
HNRNPA1-212ENST00000551679 CAPN15O75808 1086 aa13.17□□□□□ -0.3
HNRNPA1-212ENST00000551679 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
HNRNPA1-212ENST00000551679 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
HNRNPA1-212ENST00000551679 POLA2Q14181 598 aa12.96□□□□□ -0.33
HNRNPA1-212ENST00000551679 ABCB7O75027 752 aa12.95□□□□□ -0.34
HNRNPA1-212ENST00000551679 DSG3P32926 999 aa12.94□□□□□ -0.34
HNRNPA1-212ENST00000551679 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
HNRNPA1-212ENST00000551679 FBLN2P98095 1184 aa12.75□□□□□ -0.37
HNRNPA1-212ENST00000551679 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
HNRNPA1-212ENST00000551679 FKBP8Q14318 412 aa12.7□□□□□ -0.38
HNRNPA1-212ENST00000551679 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
HNRNPA1-212ENST00000551679 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
HNRNPA1-212ENST00000551679 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
HNRNPA1-212ENST00000551679 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
HNRNPA1-212ENST00000551679 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
HNRNPA1-212ENST00000551679 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
HNRNPA1-212ENST00000551679 PROM2Q8N271 834 aa12.39□□□□□ -0.43
HNRNPA1-212ENST00000551679 POTEHQ6S545 545 aa12.37□□□□□ -0.43
HNRNPA1-212ENST00000551679 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
HNRNPA1-212ENST00000551679 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
HNRNPA1-212ENST00000551679 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
HNRNPA1-212ENST00000551679 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
HNRNPA1-212ENST00000551679 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
HNRNPA1-212ENST00000551679 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
HNRNPA1-212ENST00000551679 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
HNRNPA1-212ENST00000551679 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
HNRNPA1-212ENST00000551679 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
HNRNPA1-212ENST00000551679 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
HNRNPA1-212ENST00000551679 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
HNRNPA1-212ENST00000551679 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
HNRNPA1-212ENST00000551679 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
HNRNPA1-212ENST00000551679 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
HNRNPA1-212ENST00000551679 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
HNRNPA1-212ENST00000551679 MIER1Q8N108 512 aa11.86□□□□□ -0.51
HNRNPA1-212ENST00000551679 ABCC9O60706 1549 aa11.86□□□□□ -0.51
HNRNPA1-212ENST00000551679 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
HNRNPA1-212ENST00000551679 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
HNRNPA1-212ENST00000551679 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
HNRNPA1-212ENST00000551679 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
HNRNPA1-212ENST00000551679 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
HNRNPA1-212ENST00000551679 CHRDL2Q6WN34 429 aa11.74□□□□□ -0.53
HNRNPA1-212ENST00000551679 SPOCK2Q92563 424 aa11.71□□□□□ -0.53
HNRNPA1-212ENST00000551679 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
HNRNPA1-212ENST00000551679 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
HNRNPA1-212ENST00000551679 MNX1P50219 401 aaPredicted RBP11.69□□□□□ -0.54
HNRNPA1-212ENST00000551679 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
HNRNPA1-212ENST00000551679 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
HNRNPA1-212ENST00000551679 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
HNRNPA1-212ENST00000551679 NUBP1P53384 320 aa11.58□□□□□ -0.56
HNRNPA1-212ENST00000551679 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
HNRNPA1-212ENST00000551679 PKD2Q13563 968 aa11.56□□□□□ -0.56
HNRNPA1-212ENST00000551679 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
HNRNPA1-212ENST00000551679 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
HNRNPA1-212ENST00000551679 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
HNRNPA1-212ENST00000551679 GSE1Q14687 1217 aa11.46□□□□□ -0.57
HNRNPA1-212ENST00000551679 FAM212AQ96EL1 285 aa11.46□□□□□ -0.57
HNRNPA1-212ENST00000551679 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms