RNA–Protein interactions for RNA: ENST00000621089.2

POLR1D-207, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 1,606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-207ENST00000621089 NISCHQ9Y2I1 1504 aa38.19■■■■□ 3.7
POLR1D-207ENST00000621089 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
POLR1D-207ENST00000621089 ABCC9O60706 1549 aa33.93■■■■□ 3.02
POLR1D-207ENST00000621089 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
POLR1D-207ENST00000621089 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
POLR1D-207ENST00000621089 NACADO15069 1562 aa32.22■■■□□ 2.75
POLR1D-207ENST00000621089 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
POLR1D-207ENST00000621089 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
POLR1D-207ENST00000621089 ZCCHC6Q5VYS8 1495 aaKnown RBP31.68■■■□□ 2.66
POLR1D-207ENST00000621089 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
POLR1D-207ENST00000621089 DNAJC5BQ9UF47 199 aa31.57■■■□□ 2.64
POLR1D-207ENST00000621089 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
POLR1D-207ENST00000621089 BICRAQ9NZM4 1560 aa31.38■■■□□ 2.61
POLR1D-207ENST00000621089 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
POLR1D-207ENST00000621089 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
POLR1D-207ENST00000621089 CC2D2AQ9P2K1 1620 aa30.64■■■□□ 2.5
POLR1D-207ENST00000621089 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
POLR1D-207ENST00000621089 CECR2Q9BXF3 1484 aa30.54■■■□□ 2.48
POLR1D-207ENST00000621089 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
POLR1D-207ENST00000621089 SMARCA4P51532 1647 aa29.72■■■□□ 2.35
POLR1D-207ENST00000621089 ATAD2BQ9ULI0 1458 aa29.7■■■□□ 2.34
POLR1D-207ENST00000621089 SMARCA2P51531 1590 aa29.64■■■□□ 2.34
POLR1D-207ENST00000621089 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.33
POLR1D-207ENST00000621089 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
POLR1D-207ENST00000621089 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
POLR1D-207ENST00000621089 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
POLR1D-207ENST00000621089 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
POLR1D-207ENST00000621089 ERCC6Q03468 1493 aa29.32■■■□□ 2.28
POLR1D-207ENST00000621089 NESP48681 1621 aa29.21■■■□□ 2.27
POLR1D-207ENST00000621089 CUX2O14529 1486 aa29.11■■■□□ 2.25
POLR1D-207ENST00000621089 WIZO95785 1651 aa29.1■■■□□ 2.25
POLR1D-207ENST00000621089 LAMC3Q9Y6N6 1575 aa29.04■■■□□ 2.24
POLR1D-207ENST00000621089 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
POLR1D-207ENST00000621089 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
POLR1D-207ENST00000621089 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.22
POLR1D-207ENST00000621089 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
POLR1D-207ENST00000621089 KIF21AQ7Z4S6 1674 aa28.82■■■□□ 2.2
POLR1D-207ENST00000621089 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
POLR1D-207ENST00000621089 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
POLR1D-207ENST00000621089 MRC2Q9UBG0 1479 aa28.6■■■□□ 2.17
POLR1D-207ENST00000621089 CFTRP13569 1480 aa28.59■■■□□ 2.17
POLR1D-207ENST00000621089 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
POLR1D-207ENST00000621089 FANCD2Q9BXW9 1451 aa28.55■■■□□ 2.16
POLR1D-207ENST00000621089 WDR62O43379 1518 aa28.49■■■□□ 2.15
POLR1D-207ENST00000621089 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
POLR1D-207ENST00000621089 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
POLR1D-207ENST00000621089 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
POLR1D-207ENST00000621089 URB2Q14146 1524 aaKnown RBP28.27■■■□□ 2.12
POLR1D-207ENST00000621089 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
POLR1D-207ENST00000621089 ABCC8Q09428 1581 aa28.01■■■□□ 2.07
POLR1D-207ENST00000621089 IFT140Q96RY7 1462 aa27.98■■■□□ 2.07
POLR1D-207ENST00000621089 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
POLR1D-207ENST00000621089 OSCARQ8IYS5 282 aa27.92■■■□□ 2.06
POLR1D-207ENST00000621089 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
POLR1D-207ENST00000621089 POLA1P09884 1462 aaPredicted RBP27.76■■■□□ 2.03
POLR1D-207ENST00000621089 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
POLR1D-207ENST00000621089 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
POLR1D-207ENST00000621089 TARBP1Q13395 1621 aaKnown RBP27.72■■■□□ 2.03
POLR1D-207ENST00000621089 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.033e-6■■□□□ 11.4
POLR1D-207ENST00000621089 SOGA1O94964 1423 aa27.68■■■□□ 2.02
POLR1D-207ENST00000621089 RAD54L2Q9Y4B4 1467 aa27.67■■■□□ 2.02
POLR1D-207ENST00000621089 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
POLR1D-207ENST00000621089 CUX1P39880 1505 aa27.63■■■□□ 2.01
POLR1D-207ENST00000621089 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
POLR1D-207ENST00000621089 FBLN2P98095 1184 aa27.58■■■□□ 2.01
POLR1D-207ENST00000621089 CHD1O14646 1710 aa27.49■■□□□ 1.99
POLR1D-207ENST00000621089 WDR97A6NE52 1622 aa27.47■■□□□ 1.99
POLR1D-207ENST00000621089 RIMBP3CA6NJZ7 1639 aa27.43■■□□□ 1.98
POLR1D-207ENST00000621089 RIMBP3BA6NNM3 1639 aa27.43■■□□□ 1.98
POLR1D-207ENST00000621089 RIMBP3Q9UFD9 1639 aa27.43■■□□□ 1.98
POLR1D-207ENST00000621089 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
POLR1D-207ENST00000621089 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
POLR1D-207ENST00000621089 GRIN2BQ13224 1484 aa27.39■■□□□ 1.97
POLR1D-207ENST00000621089 ARHGEF11O15085 1522 aa27.38■■□□□ 1.97
POLR1D-207ENST00000621089 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
POLR1D-207ENST00000621089 GAPVD1Q14C86 1478 aa27.33■■□□□ 1.97
POLR1D-207ENST00000621089 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
POLR1D-207ENST00000621089 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
POLR1D-207ENST00000621089 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
POLR1D-207ENST00000621089 PBRM1Q86U86 1689 aa27.26■■□□□ 1.96
POLR1D-207ENST00000621089 SYNJ2O15056 1496 aa27.26■■□□□ 1.95
POLR1D-207ENST00000621089 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
POLR1D-207ENST00000621089 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
POLR1D-207ENST00000621089 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
POLR1D-207ENST00000621089 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
POLR1D-207ENST00000621089 CLASP1Q7Z460 1538 aa27.15■■□□□ 1.94
POLR1D-207ENST00000621089 ARAP1Q96P48 1450 aa27.12■■□□□ 1.93
POLR1D-207ENST00000621089 GRIN2AQ12879 1464 aa27.02■■□□□ 1.92
POLR1D-207ENST00000621089 ADAMTS12P58397 1594 aa27.01■■□□□ 1.91
POLR1D-207ENST00000621089 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
POLR1D-207ENST00000621089 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
POLR1D-207ENST00000621089 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
POLR1D-207ENST00000621089 TRHP20396 242 aaPredicted RBP26.9■■□□□ 1.9
POLR1D-207ENST00000621089 NUP160Q12769 1436 aa26.9■■□□□ 1.9
POLR1D-207ENST00000621089 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
POLR1D-207ENST00000621089 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
POLR1D-207ENST00000621089 AEBP2Q6ZN18 517 aaPredicted RBP26.79■■□□□ 1.88
POLR1D-207ENST00000621089 ERCC6L2Q5T890 1561 aa26.77■■□□□ 1.88
POLR1D-207ENST00000621089 IGF1RP08069 1367 aa26.73■■□□□ 1.87
POLR1D-207ENST00000621089 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms