RNA–Protein interactions for RNA: ENST00000399696.3

POLR1D-202, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene POLR1D, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-202ENST00000399696 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
POLR1D-202ENST00000399696 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
POLR1D-202ENST00000399696 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
POLR1D-202ENST00000399696 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
POLR1D-202ENST00000399696 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
POLR1D-202ENST00000399696 FOXD1Q16676 465 aa19.42■□□□□ 0.7
POLR1D-202ENST00000399696 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
POLR1D-202ENST00000399696 ADRA2BP18089 450 aa18.76■□□□□ 0.59
POLR1D-202ENST00000399696 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
POLR1D-202ENST00000399696 MSH5O43196 834 aa17.8■□□□□ 0.44
POLR1D-202ENST00000399696 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
POLR1D-202ENST00000399696 KCNA4P22459 653 aa17.15■□□□□ 0.34
POLR1D-202ENST00000399696 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
POLR1D-202ENST00000399696 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
POLR1D-202ENST00000399696 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
POLR1D-202ENST00000399696 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
POLR1D-202ENST00000399696 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
POLR1D-202ENST00000399696 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
POLR1D-202ENST00000399696 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
POLR1D-202ENST00000399696 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
POLR1D-202ENST00000399696 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
POLR1D-202ENST00000399696 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
POLR1D-202ENST00000399696 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
POLR1D-202ENST00000399696 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
POLR1D-202ENST00000399696 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
POLR1D-202ENST00000399696 ZBTB22O15209 634 aa15.84■□□□□ 0.13
POLR1D-202ENST00000399696 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
POLR1D-202ENST00000399696 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
POLR1D-202ENST00000399696 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
POLR1D-202ENST00000399696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.085e-7■■■□□ 18.6
POLR1D-202ENST00000399696 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
POLR1D-202ENST00000399696 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
POLR1D-202ENST00000399696 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
POLR1D-202ENST00000399696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
POLR1D-202ENST00000399696 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
POLR1D-202ENST00000399696 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
POLR1D-202ENST00000399696 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
POLR1D-202ENST00000399696 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
POLR1D-202ENST00000399696 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
POLR1D-202ENST00000399696 APLP2Q06481 763 aa14.96□□□□□ -0.01
POLR1D-202ENST00000399696 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
POLR1D-202ENST00000399696 CAPN15O75808 1086 aa14.79□□□□□ -0.04
POLR1D-202ENST00000399696 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
POLR1D-202ENST00000399696 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
POLR1D-202ENST00000399696 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
POLR1D-202ENST00000399696 DSG3P32926 999 aa14.61□□□□□ -0.07
POLR1D-202ENST00000399696 POLA2Q14181 598 aa14.59□□□□□ -0.07
POLR1D-202ENST00000399696 ABCB7O75027 752 aa14.54□□□□□ -0.08
POLR1D-202ENST00000399696 MKRN4PQ13434 485 aaPredicted RBP14.44□□□□□ -0.1
POLR1D-202ENST00000399696 ZBTB12Q9Y330 459 aaPredicted RBP14.33□□□□□ -0.12
POLR1D-202ENST00000399696 FBLN2P98095 1184 aa14.3□□□□□ -0.12
POLR1D-202ENST00000399696 FKBP8Q14318 412 aa14.21□□□□□ -0.13
POLR1D-202ENST00000399696 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
POLR1D-202ENST00000399696 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
POLR1D-202ENST00000399696 PROM2Q8N271 834 aa14□□□□□ -0.17
POLR1D-202ENST00000399696 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
POLR1D-202ENST00000399696 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
POLR1D-202ENST00000399696 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
POLR1D-202ENST00000399696 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
POLR1D-202ENST00000399696 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
POLR1D-202ENST00000399696 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
POLR1D-202ENST00000399696 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLR1D-202ENST00000399696 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
POLR1D-202ENST00000399696 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
POLR1D-202ENST00000399696 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
POLR1D-202ENST00000399696 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
POLR1D-202ENST00000399696 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
POLR1D-202ENST00000399696 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
POLR1D-202ENST00000399696 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
POLR1D-202ENST00000399696 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
POLR1D-202ENST00000399696 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
POLR1D-202ENST00000399696 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
POLR1D-202ENST00000399696 MIER1Q8N108 512 aa13.29□□□□□ -0.28
POLR1D-202ENST00000399696 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
POLR1D-202ENST00000399696 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
POLR1D-202ENST00000399696 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
POLR1D-202ENST00000399696 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
POLR1D-202ENST00000399696 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
POLR1D-202ENST00000399696 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
POLR1D-202ENST00000399696 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
POLR1D-202ENST00000399696 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
POLR1D-202ENST00000399696 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
POLR1D-202ENST00000399696 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
POLR1D-202ENST00000399696 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
POLR1D-202ENST00000399696 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
POLR1D-202ENST00000399696 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
POLR1D-202ENST00000399696 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
POLR1D-202ENST00000399696 NUBP1P53384 320 aa13.05□□□□□ -0.32
POLR1D-202ENST00000399696 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
POLR1D-202ENST00000399696 PKD2Q13563 968 aa12.99□□□□□ -0.33
POLR1D-202ENST00000399696 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
POLR1D-202ENST00000399696 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
POLR1D-202ENST00000399696 GSE1Q14687 1217 aa12.85□□□□□ -0.35
POLR1D-202ENST00000399696 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
POLR1D-202ENST00000399696 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
POLR1D-202ENST00000399696 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
POLR1D-202ENST00000399696 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
POLR1D-202ENST00000399696 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
POLR1D-202ENST00000399696 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
POLR1D-202ENST00000399696 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms