RNA–Protein interactions for RNA: ENST00000637389.1

POLR1D-222, Transcript of RNA polymerase I and III subunit D, human

TSL 5

Gene POLR1D, Length 129 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1D-222	ENST00000637389	AEBP2	Q6ZN18	517 aa	Predicted RBP	9.71	□□□□□ -0.86
POLR1D-222	ENST00000637389	CHIC1	Q5VXU3	224 aa		9.26	□□□□□ -0.93
POLR1D-222	ENST00000637389	SENP3	Q9H4L4	574 aa	Predicted RBP	8.5	□□□□□ -1.05
POLR1D-222	ENST00000637389	PHF23	Q9BUL5	403 aa	Predicted RBP	8.29	□□□□□ -1.08
POLR1D-222	ENST00000637389	POTED	Q86YR6	584 aa		8.07	□□□□□ -1.12
POLR1D-222	ENST00000637389	FOXD1	Q16676	465 aa		7.89	□□□□□ -1.15
POLR1D-222	ENST00000637389	MSH5	O43196	834 aa		7.66	□□□□□ -1.18
POLR1D-222	ENST00000637389	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.32	□□□□□ -1.24
POLR1D-222	ENST00000637389	PLPPR3	Q6T4P5	718 aa		7.01	□□□□□ -1.29
POLR1D-222	ENST00000637389	PPP6R1	Q9UPN7	881 aa		7	□□□□□ -1.29
POLR1D-222	ENST00000637389	ADRA2B	P18089	450 aa		6.99	□□□□□ -1.29
POLR1D-222	ENST00000637389	CACNB1	Q02641	598 aa	Predicted RBP	6.8	□□□□□ -1.32
POLR1D-222	ENST00000637389	DMRT2	Q9Y5R5	561 aa		6.64	□□□□□ -1.35
POLR1D-222	ENST00000637389	SCAF1	Q9H7N4	1312 aa	Known RBP	6.59	□□□□□ -1.35
POLR1D-222	ENST00000637389	MAPK8IP2	Q13387	824 aa	Predicted RBP	6.52	□□□□□ -1.37
POLR1D-222	ENST00000637389	DCAF8L1	A6NGE4	600 aa		6.43	□□□□□ -1.38
POLR1D-222	ENST00000637389	RNF39	Q9H2S5	420 aa		6.41	□□□□□ -1.38
POLR1D-222	ENST00000637389	C1QBP	Q07021	282 aa	Known RBP	6.37	□□□□□ -1.39
POLR1D-222	ENST00000637389	POTEH	Q6S545	545 aa		6.28	□□□□□ -1.4
POLR1D-222	ENST00000637389	HOXD11	P31277	338 aa	Predicted RBP	6.24	□□□□□ -1.41
POLR1D-222	ENST00000637389	DNAJC5B	Q9UF47	199 aa		6.17	□□□□□ -1.42
POLR1D-222	ENST00000637389	RNF216	Q9NWF9	866 aa	Predicted RBP	6.12	□□□□□ -1.43
POLR1D-222	ENST00000637389	CNKSR2	Q8WXI2	1034 aa		6.08	□□□□□ -1.44
POLR1D-222	ENST00000637389	PPP4R3CP	Q6ZMV5	832 aa		6.05	□□□□□ -1.44
POLR1D-222	ENST00000637389	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	6	□□□□□ -1.45	5e-7	■■■□□ 18.6
POLR1D-222	ENST00000637389	DSG3	P32926	999 aa		5.87	□□□□□ -1.47
POLR1D-222	ENST00000637389	CAPN15	O75808	1086 aa		5.86	□□□□□ -1.47
POLR1D-222	ENST00000637389	NCBP3	Q53F19	620 aa	Known RBP	5.8	□□□□□ -1.48
POLR1D-222	ENST00000637389	APLP2	Q06481	763 aa		5.75	□□□□□ -1.49
POLR1D-222	ENST00000637389	SPINK5	Q9NQ38	1064 aa	Predicted RBP	5.75	□□□□□ -1.49
POLR1D-222	ENST00000637389		U3KPZ7	1027 aa	Predicted RBP	5.74	□□□□□ -1.49
POLR1D-222	ENST00000637389	RBM42	Q9BTD8	480 aa	Known RBP	5.73	□□□□□ -1.49
POLR1D-222	ENST00000637389	SP7	Q8TDD2	431 aa	Predicted RBP	5.7	□□□□□ -1.5
POLR1D-222	ENST00000637389	CHRDL2	Q6WN34	429 aa		5.68	□□□□□ -1.5
POLR1D-222	ENST00000637389	ZNF219	Q9P2Y4	722 aa	Predicted RBP	5.68	□□□□□ -1.5
POLR1D-222	ENST00000637389	TRH	P20396	242 aa	Predicted RBP	5.66	□□□□□ -1.5
POLR1D-222	ENST00000637389	ABCB7	O75027	752 aa		5.63	□□□□□ -1.51
POLR1D-222	ENST00000637389	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	5.6	□□□□□ -1.51
POLR1D-222	ENST00000637389	HNRNPUL2	Q1KMD3	747 aa	Known RBP	5.6	□□□□□ -1.51
POLR1D-222	ENST00000637389	NPM3	O75607	178 aa	Known RBP	5.57	□□□□□ -1.52
POLR1D-222	ENST00000637389	HAX1	O00165	279 aa		5.51	□□□□□ -1.53
POLR1D-222	ENST00000637389	SAMD1	Q6SPF0	538 aa	Predicted RBP	5.49	□□□□□ -1.53
POLR1D-222	ENST00000637389	AKT1S1	Q96B36	256 aa		5.46	□□□□□ -1.54
POLR1D-222	ENST00000637389	PIP4P2	Q8N4L2	257 aa		5.43	□□□□□ -1.54
POLR1D-222	ENST00000637389	POLA2	Q14181	598 aa		5.4	□□□□□ -1.54
POLR1D-222	ENST00000637389	SLC4A2	P04920	1241 aa		5.39	□□□□□ -1.55
POLR1D-222	ENST00000637389	PLSCR2	Q9NRY7	297 aa		5.37	□□□□□ -1.55
POLR1D-222	ENST00000637389	REM2	Q8IYK8	340 aa	Predicted RBP	5.36	□□□□□ -1.55
POLR1D-222	ENST00000637389	FXR2	P51116	673 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
POLR1D-222	ENST00000637389	LHX8	Q68G74	356 aa		5.35	□□□□□ -1.55
POLR1D-222	ENST00000637389	ZBTB12	Q9Y330	459 aa	Predicted RBP	5.35	□□□□□ -1.55
POLR1D-222	ENST00000637389	PITPNM1	O00562	1244 aa		5.28	□□□□□ -1.56
POLR1D-222	ENST00000637389	EVX2	Q03828	476 aa		5.27	□□□□□ -1.57
POLR1D-222	ENST00000637389	MYCN	P04198	464 aa	Predicted RBP	5.24	□□□□□ -1.57
POLR1D-222	ENST00000637389	GABBR2	O75899	941 aa		5.22	□□□□□ -1.57
POLR1D-222	ENST00000637389	C19orf67	A6NJJ6	358 aa		5.19	□□□□□ -1.58
POLR1D-222	ENST00000637389	PRKAR2A	P13861	404 aa	Known RBP	5.19	□□□□□ -1.58
POLR1D-222	ENST00000637389	OSCAR	Q8IYS5	282 aa		5.19	□□□□□ -1.58
POLR1D-222	ENST00000637389	CLCN6	P51797	869 aa		5.15	□□□□□ -1.59
POLR1D-222	ENST00000637389	SPDYE1	Q8NFV5	336 aa	Predicted RBP	5.12	□□□□□ -1.59
POLR1D-222	ENST00000637389	CLEC11A	Q9Y240	323 aa		5.12	□□□□□ -1.59
POLR1D-222	ENST00000637389	SPDYE2B	A6NHP3	402 aa		5.1	□□□□□ -1.59
POLR1D-222	ENST00000637389	SPDYE6	P0CI01	402 aa		5.1	□□□□□ -1.59
POLR1D-222	ENST00000637389	SPDYE2	Q495Y8	402 aa		5.1	□□□□□ -1.59
POLR1D-222	ENST00000637389	PCDH10	Q9P2E7	1040 aa		5.1	□□□□□ -1.59
POLR1D-222	ENST00000637389	KCNA4	P22459	653 aa		5.07	□□□□□ -1.6
POLR1D-222	ENST00000637389	DCBLD2	Q96PD2	775 aa		5.07	□□□□□ -1.6
POLR1D-222	ENST00000637389	POTEM	A6NI47	508 aa		5.05	□□□□□ -1.6
POLR1D-222	ENST00000637389	FBLN2	P98095	1184 aa		5.03	□□□□□ -1.6
POLR1D-222	ENST00000637389	POTEI	P0CG38	1075 aa		5.02	□□□□□ -1.61
POLR1D-222	ENST00000637389	POTEG	Q6S5H5	508 aa		5.02	□□□□□ -1.61
POLR1D-222	ENST00000637389	ATF5	Q9Y2D1	282 aa	Predicted RBP	5.01	□□□□□ -1.61
POLR1D-222	ENST00000637389	PRR29	P0C7W0	189 aa		5	□□□□□ -1.61
POLR1D-222	ENST00000637389	CD44	P16070	742 aa	Known RBP	5	□□□□□ -1.61
POLR1D-222	ENST00000637389	CHADL	Q6NUI6	762 aa		4.99	□□□□□ -1.61
POLR1D-222	ENST00000637389	ZNF692	Q9BU19	519 aa	Predicted RBP	4.98	□□□□□ -1.61
POLR1D-222	ENST00000637389	OTUD5	Q96G74	571 aa		4.95	□□□□□ -1.62
POLR1D-222	ENST00000637389	FOXD4L1	Q9NU39	408 aa		4.94	□□□□□ -1.62
POLR1D-222	ENST00000637389	SSUH2	Q9Y2M2	353 aa		4.92	□□□□□ -1.62
POLR1D-222	ENST00000637389	FARP1	Q9Y4F1	1045 aa	Predicted RBP	4.92	□□□□□ -1.62
POLR1D-222	ENST00000637389	MAMSTR	Q6ZN01	415 aa		4.9	□□□□□ -1.63
POLR1D-222	ENST00000637389	ZNF579	Q8NAF0	562 aa	Known RBP	4.89	□□□□□ -1.63
POLR1D-222	ENST00000637389	ZRANB1	Q9UGI0	708 aa		4.88	□□□□□ -1.63
POLR1D-222	ENST00000637389	ATXN8OS	P0DMR3	200 aa		4.87	□□□□□ -1.63
POLR1D-222	ENST00000637389	PAK3	O75914	559 aa	Predicted RBP	4.85	□□□□□ -1.63
POLR1D-222	ENST00000637389	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
POLR1D-222	ENST00000637389	POTEB2	H3BUK9	544 aa		4.84	□□□□□ -1.63
POLR1D-222	ENST00000637389	FAM163A	Q96GL9	167 aa	Predicted RBP	4.84	□□□□□ -1.63
POLR1D-222	ENST00000637389	GALR2	O43603	387 aa	Predicted RBP	4.82	□□□□□ -1.64
POLR1D-222	ENST00000637389	SCUBE2	Q9NQ36	999 aa		4.82	□□□□□ -1.64
POLR1D-222	ENST00000637389	C7	P10643	843 aa		4.8	□□□□□ -1.64
POLR1D-222	ENST00000637389	SLC39A7	Q92504	469 aa		4.8	□□□□□ -1.64
POLR1D-222	ENST00000637389	CDAN1	Q8IWY9	1227 aa		4.78	□□□□□ -1.64
POLR1D-222	ENST00000637389	METRN	Q9UJH8	293 aa		4.78	□□□□□ -1.64
POLR1D-222	ENST00000637389	MKRN4P	Q13434	485 aa	Predicted RBP	4.77	□□□□□ -1.65
POLR1D-222	ENST00000637389	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.77	□□□□□ -1.65
POLR1D-222	ENST00000637389	LCE2D	Q5TA82	110 aa	Predicted RBP	4.73	□□□□□ -1.65
POLR1D-222	ENST00000637389	PELP1	Q8IZL8	1130 aa	Known RBP	4.73	□□□□□ -1.65
POLR1D-222	ENST00000637389	STAG3	Q9UJ98	1225 aa		4.73	□□□□□ -1.65
POLR1D-222	ENST00000637389	NPM1	P06748	294 aa	Known RBP eCLIP	4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms