RNA–Protein interactions for RNA: ENST00000637180.1

POLR1D-221, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 5 BASIC

Gene POLR1D, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-221ENST00000637180 NISCHQ9Y2I1 1504 aa38.15■■■■□ 3.7
POLR1D-221ENST00000637180 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
POLR1D-221ENST00000637180 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
POLR1D-221ENST00000637180 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
POLR1D-221ENST00000637180 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
POLR1D-221ENST00000637180 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
POLR1D-221ENST00000637180 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
POLR1D-221ENST00000637180 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
POLR1D-221ENST00000637180 SCRIBQ14160 1630 aa30.45■■■□□ 2.46
POLR1D-221ENST00000637180 ABCC9O60706 1549 aa30.41■■■□□ 2.46
POLR1D-221ENST00000637180 NACADO15069 1562 aa30.33■■■□□ 2.45
POLR1D-221ENST00000637180 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
POLR1D-221ENST00000637180 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
POLR1D-221ENST00000637180 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
POLR1D-221ENST00000637180 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
POLR1D-221ENST00000637180 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
POLR1D-221ENST00000637180 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
POLR1D-221ENST00000637180 WIZO95785 1651 aa29.41■■■□□ 2.3
POLR1D-221ENST00000637180 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
POLR1D-221ENST00000637180 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.26
POLR1D-221ENST00000637180 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
POLR1D-221ENST00000637180 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
POLR1D-221ENST00000637180 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
POLR1D-221ENST00000637180 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
POLR1D-221ENST00000637180 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
POLR1D-221ENST00000637180 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
POLR1D-221ENST00000637180 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
POLR1D-221ENST00000637180 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
POLR1D-221ENST00000637180 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
POLR1D-221ENST00000637180 FAM9AQ8IZU1 332 aaPredicted RBP28.78■■■□□ 2.2
POLR1D-221ENST00000637180 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
POLR1D-221ENST00000637180 HRCP23327 699 aa28.6■■■□□ 2.17
POLR1D-221ENST00000637180 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
POLR1D-221ENST00000637180 TRIM26Q12899 539 aaPredicted RBP28.46■■■□□ 2.15
POLR1D-221ENST00000637180 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
POLR1D-221ENST00000637180 EHMT2Q96KQ7 1210 aa28.45■■■□□ 2.14
POLR1D-221ENST00000637180 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
POLR1D-221ENST00000637180 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
POLR1D-221ENST00000637180 SOGA1O94964 1423 aa28.19■■■□□ 2.1
POLR1D-221ENST00000637180 EEA1Q15075 1411 aa28.16■■■□□ 2.1
POLR1D-221ENST00000637180 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
POLR1D-221ENST00000637180 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
POLR1D-221ENST00000637180 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
POLR1D-221ENST00000637180 CSRNP3Q8WYN3 585 aa28.03■■■□□ 2.08
POLR1D-221ENST00000637180 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
POLR1D-221ENST00000637180 TNIKQ9UKE5 1360 aa27.95■■■□□ 2.07
POLR1D-221ENST00000637180 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
POLR1D-221ENST00000637180 PPARGC1BQ86YN6 1023 aaKnown RBP27.93■■■□□ 2.06
POLR1D-221ENST00000637180 GOLGA3Q08378 1498 aa27.88■■■□□ 2.05
POLR1D-221ENST00000637180 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
POLR1D-221ENST00000637180 UBTFP17480 764 aaKnown RBP27.83■■■□□ 2.04
POLR1D-221ENST00000637180 KIF21BO75037 1637 aa27.79■■■□□ 2.04
POLR1D-221ENST00000637180 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
POLR1D-221ENST00000637180 BIVM-ERCC5R4GMW8 1640 aa27.76■■■□□ 2.04
POLR1D-221ENST00000637180 ZEB1P37275 1124 aaPredicted RBP27.72■■■□□ 2.03
POLR1D-221ENST00000637180 CFTRP13569 1480 aa27.67■■■□□ 2.02
POLR1D-221ENST00000637180 CUX1P39880 1505 aa27.58■■■□□ 2.01
POLR1D-221ENST00000637180 PRDM2Q13029 1718 aa27.57■■■□□ 2
POLR1D-221ENST00000637180 RAPGEF2Q9Y4G8 1499 aa27.56■■■□□ 2
POLR1D-221ENST00000637180 CLIP1P30622 1438 aa27.5■■□□□ 1.99
POLR1D-221ENST00000637180 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
POLR1D-221ENST00000637180 TTBK1Q5TCY1 1321 aaPredicted RBP27.46■■□□□ 1.99
POLR1D-221ENST00000637180 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
POLR1D-221ENST00000637180 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
POLR1D-221ENST00000637180 PRXQ9BXM0 1461 aa27.4■■□□□ 1.98
POLR1D-221ENST00000637180 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
POLR1D-221ENST00000637180 VPS8Q8N3P4 1428 aa27.36■■□□□ 1.97
POLR1D-221ENST00000637180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
POLR1D-221ENST00000637180 CCER1Q8TC90 406 aaPredicted RBP27.25■■□□□ 1.95
POLR1D-221ENST00000637180 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
POLR1D-221ENST00000637180 APLP2Q06481 763 aa27.18■■□□□ 1.94
POLR1D-221ENST00000637180 CUX2O14529 1486 aa27.15■■□□□ 1.94
POLR1D-221ENST00000637180 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
POLR1D-221ENST00000637180 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
POLR1D-221ENST00000637180 ARAP1Q96P48 1450 aa27.11■■□□□ 1.93
POLR1D-221ENST00000637180 IGF1RP08069 1367 aa27.06■■□□□ 1.92
POLR1D-221ENST00000637180 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
POLR1D-221ENST00000637180 NESP48681 1621 aa26.99■■□□□ 1.91
POLR1D-221ENST00000637180 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.91
POLR1D-221ENST00000637180 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.9
POLR1D-221ENST00000637180 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
POLR1D-221ENST00000637180 LAMC3Q9Y6N6 1575 aa26.93■■□□□ 1.9
POLR1D-221ENST00000637180 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
POLR1D-221ENST00000637180 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
POLR1D-221ENST00000637180 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
POLR1D-221ENST00000637180 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
POLR1D-221ENST00000637180 KANK4Q5T7N3 995 aaPredicted RBP26.81■■□□□ 1.88
POLR1D-221ENST00000637180 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
POLR1D-221ENST00000637180 CUL7Q14999 1698 aa26.73■■□□□ 1.87
POLR1D-221ENST00000637180 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
POLR1D-221ENST00000637180 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
POLR1D-221ENST00000637180 RRBP1Q9P2E9 1410 aaKnown RBP26.68■■□□□ 1.86
POLR1D-221ENST00000637180 DNAJC5BQ9UF47 199 aa26.67■■□□□ 1.86
POLR1D-221ENST00000637180 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
POLR1D-221ENST00000637180 KIF21AQ7Z4S6 1674 aa26.64■■□□□ 1.85
POLR1D-221ENST00000637180 TIAM1Q13009 1591 aa26.64■■□□□ 1.85
POLR1D-221ENST00000637180 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
POLR1D-221ENST00000637180 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
POLR1D-221ENST00000637180 ABCA5Q8WWZ7 1642 aa26.59■■□□□ 1.85
POLR1D-221ENST00000637180 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms